RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ZNF189O75820 626 aaPredicted RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 SRP72O76094 671 aaKnown RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 PRAMEF1O95521 474 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 SLC4A1P02730 911 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 RBP3P10745 1247 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 MTHFD1P11586 935 aaKnown RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 OAS2P29728 719 aaKnown RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 CYLC1P35663 651 aaPredicted RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 HALP42357 657 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 MAPK9P45984 424 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 CCR10P46092 362 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 ZNF75DP51815 510 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 ZNF140P52738 457 aaPredicted RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 POLE2P56282 527 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 PPP1CAP62136 330 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 PDE1BQ01064 536 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 MC1RQ01726 317 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 OTUD4Q01804 1114 aaKnown RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 KCNAB2Q13303 367 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 KLF1Q13351 362 aaPredicted RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 GTF2H3Q13889 308 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 NFE2L1Q14494 772 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 SEPT7Q16181 437 aaKnown RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 LONRF2Q1L5Z9 754 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 ITPRIPL1Q6GPH6 555 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 C6orf15Q6UXA7 325 aaPredicted RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 ATG14Q6ZNE5 492 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 TMEM139Q8IV31 216 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 TRIM48Q8IWZ4 208 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 UNC5BQ8IZJ1 945 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 D2HGDHQ8N465 521 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 BEND7Q8N7W2 519 aaPredicted RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 OR4K2Q8NGD2 314 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 GPR150Q8NGU9 434 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 KIAA1143Q96AT1 154 aaPredicted RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 HAUS1Q96CS2 278 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 CXorf40BQ96DE9 158 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 TTC25Q96NG3 672 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 TGM7Q96PF1 710 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 PPP1R2P1Q96PQ5 205 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 OR6C1Q96RD1 312 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 INSM2Q96T92 566 aaPredicted RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 CD180Q99467 661 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 ARHGAP9Q9BRR9 750 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 ULBP3Q9BZM4 244 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 FAM117AQ9C073 453 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 CLMPQ9H6B4 373 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 KIR3DX1Q9H7L2 352 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 LUC7LQ9NQ29 371 aaKnown RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 KLHL3Q9UH77 587 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 RPS6KL1Q9Y6S9 549 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 RP1L1Q8IWN7 2480 aaPredicted RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 ANKRD12Q6UB98 2062 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 DOPEY2Q9Y3R5 2298 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 GRID2IPA4D2P6 1211 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 OR5K3A6NET4 321 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 OR2AG2A6NM03 316 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 H7C0C1 242 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 SPAG6O75602 509 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 TJP3O95049 919 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 CRTAMO95727 393 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 MSL3P1P0C860 447 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 FOLR1P15328 257 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 PSMB4P28070 264 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 TNNT3P45378 269 aaPredicted RBP8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 ATP5OP48047 213 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 PRLHRP49683 370 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 RWDD2BP57060 319 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 EIF3EP60228 445 aaKnown RBP8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 KCNC4Q03721 635 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 OLIG2Q13516 323 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 GPR33Q49SQ1 333 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 CACHD1Q5VU97 1274 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 KLHL35Q6PF15 583 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 RAD9BQ6WBX8 426 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 SNX20Q7Z614 316 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 CCDC50Q8IVM0 306 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 CDKL3Q8IVW4 592 aaPredicted RBP8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 NXPE1Q8N323 547 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 GDAP1Q8TB36 358 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 SLC35B2Q8TB61 432 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 HEXDCQ8WVB3 486 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 APOBEC4Q8WW27 367 aaKnown RBP8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 STARD8Q92502 1023 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 CCM2Q9BSQ5 444 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 FICDQ9BVA6 458 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 FSD1LQ9BXM9 530 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 LATS2Q9NRM7 1088 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 SLC24A2Q9UI40 661 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 BTRCQ9Y297 605 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 KCNMB2Q9Y691 235 aa8.18□□□□□ -1.1
SMARCB1-207ENST00000491967 FER1L5A0AVI2 2057 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 SNRNP200O75643 2136 aaKnown RBP8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 CLEC18AA5D8T8 446 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 TLCD2A6NGC4 264 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 MROH6A6NGR9 719 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 C21orf140B9A014 251 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 F5H423 210 aaPredicted RBP8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 DDX3YO15523 660 aaKnown RBP8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 KCNN4O15554 427 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms