RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 PTSQ03393 145 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 GALNT3Q14435 633 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 PCSK7Q16549 785 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 DBN1Q16643 649 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 CDKN3Q16667 212 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 PPM1JQ5JR12 505 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 PSAPL1Q6NUJ1 521 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 ADGRG6Q86SQ4 1221 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 NAXDQ8IW45 347 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 SAP25Q8TEE9 199 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 CENPKQ9BS16 269 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 CCDC106Q9BWC9 280 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 STN1Q9H668 368 aaKnown RBP9.31□□□□□ -0.92
BRCA1-219ENST00000491747 USP29Q9HBJ7 922 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 THAP1Q9NVV9 213 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 SPTY2D1-AS1A0A0U1RR47 76 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 K7ESM1 405 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 SDC3O75056 442 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 CBFA2T3O75081 653 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 SNNO75324 88 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 AVILO75366 819 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 RFPL1O75677 317 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 C1QAP02745 245 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 PCCBP05166 539 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 C1SP09871 688 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 KITP10721 976 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 CSRP1P21291 193 aaKnown RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 CRHR1P34998 444 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 ETV3P41162 512 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 RXRGP48443 463 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 SERPINB9P50453 376 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 CCT8P50990 548 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 CDC16Q13042 620 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 CUL3Q13618 768 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 PDE1CQ14123 709 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 INPP5AQ14642 412 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 ACOX1Q15067 660 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 PDCD2Q16342 344 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 LRRC66Q68CR7 880 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 KDELC1Q6UW63 502 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 PID1Q7Z2X4 250 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 ST13P4Q8IZP2 240 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 FBXO27Q8NI29 283 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 VCX3AQ9NNX9 186 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 MARCOQ9UEW3 520 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 PCOLCE2Q9UKZ9 415 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 PCDHGB2Q9Y5G2 931 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 PCNX2A6NKB5 2137 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 MYLKQ15746 1914 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 CABIN1Q9Y6J0 2220 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 MED19A0JLT2 244 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 CAPN8A6NHC0 703 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 ANKRD66B4E2M5 251 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 KCNN4O15554 427 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 PCDHGA12O60330 932 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 PMPCBO75439 489 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 CLDN7O95471 211 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 BPGMP07738 259 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 ZCCHC18P0CG32 403 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 CYP2A6P11509 494 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 KCNA4P22459 653 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 EPHA8P29322 1005 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 GSTT1P30711 240 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 RABIFP47224 123 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 NOVA1P51513 510 aaKnown RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 EPHB1P54762 984 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 EIF2B5Q13144 721 aaKnown RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 STX3Q13277 289 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 Q6ZVL8 140 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 USP45Q70EL2 814 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 TECPR1Q7Z6L1 1165 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 NDUFAF2Q8N183 169 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 PPP1R14CQ8TAE6 165 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 BAHD1Q8TBE0 780 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 FAM174AQ8TBP5 190 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 SETD7Q8WTS6 366 aaKnown RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 EID2BQ96D98 161 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 CLPTM1LQ96KA5 538 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 TCEAL2Q9H3H9 227 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 PCMTD2Q9NV79 361 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 UCKL1Q9NWZ5 548 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 KLHL8Q9P2G9 620 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 CD84Q9UIB8 345 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 OR1A2Q9Y585 309 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 COL5A1P20908 1838 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-219ENST00000491747 SPEGQ15772 3267 aa9.3□□□□□ -0.92
BRCA1-219ENST00000491747 SPAARA0A1B0GVQ0 90 aa9.29□□□□□ -0.92
BRCA1-219ENST00000491747 SDR42E2A6NKP2 422 aa9.29□□□□□ -0.92
BRCA1-219ENST00000491747 CXorf49A8MYA2 514 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-219ENST00000491747 MTSS1O43312 755 aa9.29□□□□□ -0.92
BRCA1-219ENST00000491747 DFNA5O60443 496 aa9.29□□□□□ -0.92
BRCA1-219ENST00000491747 KLHL2O95198 593 aa9.29□□□□□ -0.92
BRCA1-219ENST00000491747 APRTP07741 180 aa9.29□□□□□ -0.92
BRCA1-219ENST00000491747 PIRTP0C851 137 aa9.29□□□□□ -0.92
BRCA1-219ENST00000491747 CNTFP26441 200 aa9.29□□□□□ -0.92
BRCA1-219ENST00000491747 RPS6KA3P51812 740 aa9.29□□□□□ -0.92
BRCA1-219ENST00000491747 N4BP2L1Q5TBK1 243 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-219ENST00000491747 C4orf22Q6V702 233 aa9.29□□□□□ -0.92
BRCA1-219ENST00000491747 ACAD11Q709F0 780 aa9.29□□□□□ -0.92
BRCA1-219ENST00000491747 SLC25A45Q8N413 288 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms