RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 FCRL3Q96P31 734 aaPredicted RBP15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 KCNK4Q9NYG8 393 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ZNF624Q9P2J8 865 aaPredicted RBP15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ATXN7L1Q9ULK2 861 aaPredicted RBP15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 PSMD13Q9UNM6 376 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 NCOR2Q9Y618 2525 aa15.96■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 IGHV1OR21-1A0A087WYE8 117 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 ZCWPW2A0A1B0GU75 182 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 GOLGA8KD6RF30 607 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 GOLGA8TH3BQL2 631 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 SLC35G4P0C7Q5 338 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 RPL21P46778 160 aaKnown RBP15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 ARCN1P48444 511 aaKnown RBP15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 GPLD1P80108 840 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 CAMK2BQ13554 666 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 ISXQ2M1V0 245 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 BBS9Q3SYG4 887 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 AMZ1Q400G9 498 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 MAP9Q49MG5 647 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 ZNF658BQ4V348 819 aaPredicted RBP15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 SDCCAG8Q86SQ7 713 aaPredicted RBP15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 PDIK1LQ8N165 341 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 LILRA3Q8N6C8 439 aaPredicted RBP15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 BBOF1Q8ND07 529 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 TMEM121BQ9BXQ6 578 aaPredicted RBP15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 WWP1Q9H0M0 922 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 COG4Q9H9E3 785 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 UCK1Q9HA47 277 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 SNX24Q9Y343 169 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 PCDHB1Q9Y5F3 818 aa15.95■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 RP1P56715 2156 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 ASXL3Q9C0F0 2248 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 LILRA5A6NI73 299 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 PRMT5O14744 637 aaPredicted RBP15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 PFDN6O15212 129 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 NDUFS3O75489 264 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 BANF1O75531 89 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 POLBP06746 335 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 PGAM1P18669 254 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 OGNP20774 298 aaKnown RBP15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 CD1CP29017 333 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 PDX1P52945 283 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 EPHA4P54764 986 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 ARL4CP56559 192 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 TUBB2AQ13885 445 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 RPE65Q16518 533 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 HIF1AQ16665 826 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 CLPPQ16740 277 aaPredicted RBP15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 LONRF1Q17RB8 773 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 TYSND1Q2T9J0 566 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 MSS51Q4VC12 460 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 RNF187Q5TA31 235 aaPredicted RBP15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 ZNF449Q6P9G9 518 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 UNQ6494/PRO21346Q6UXR6 183 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 RBM12BQ8IXT5 1001 aaKnown RBP15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 GPR150Q8NGU9 434 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 OR10G6Q8NH81 332 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 GRAMD1AQ96CP6 724 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 AHCYL2Q96HN2 611 aaKnown RBP15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 C12orf66Q96MD2 445 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 TMEM74Q96NL1 305 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 ERP44Q9BS26 406 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 TUBB2BQ9BVA1 445 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 TSSK1BQ9BXA7 367 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 DPH5Q9H2P9 285 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 IL1RAPL1Q9NZN1 696 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 ENTPD2Q9Y5L3 495 aa15.94■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 SPEGQ15772 3267 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 LIN7AO14910 233 aaPredicted RBP15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 TP73O15350 636 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 DUX1O43812 170 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 CPNE6O95741 557 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 MTHFD1P11586 935 aaKnown RBP15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 PPM1FP49593 454 aaPredicted RBP15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 INHBCP55103 352 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 RPA4Q13156 261 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 THOC5Q13769 683 aaKnown RBP15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 CRYMQ14894 314 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 NKAIN2Q5VXU1 208 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 NEPROQ6NW34 567 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 TMEM26Q6ZUK4 368 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 B3GNT8Q7Z7M8 397 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 PIM3Q86V86 326 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 LRRC6Q86X45 466 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 KIF18AQ8NI77 898 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 ELMO1Q92556 727 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 RMDN2Q96LZ7 410 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 PWWP2AQ96N64 755 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 INSM2Q96T92 566 aaPredicted RBP15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 TCF12Q99081 682 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 EBNA1BP2Q99848 306 aaKnown RBP15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 NUDT22Q9BRQ3 303 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 NAT9Q9BTE0 207 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 TBC1D10AQ9BXI6 508 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 FOXP3Q9BZS1 431 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 ZMYND15Q9H091 742 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 RAB17Q9H0T7 212 aa15.93■□□□□ 0.14
MSH5-SAPCD1-206ENST00000491552 SLC40A1Q9NP59 571 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms