RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ZNF189O75820 626 aaPredicted RBP17.62■□□□□ 0.41
HMGN1-219ENST00000491183 ITGB2P05107 769 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 PTMAP06454 111 aaKnown RBP17.62■□□□□ 0.41
HMGN1-219ENST00000491183 TPH1P17752 444 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 CAPZBP47756 277 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 SEPHS1P49903 392 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 PPP1CAP62136 330 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 SH3BP2P78314 561 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 PDE1BQ01064 536 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 TBR1Q16650 682 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 ARHGEF18Q6ZSZ5 1173 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 ZNF605Q86T29 641 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 KLHL6Q8WZ60 621 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 LINC00615Q96LM1 132 aaPredicted RBP17.62■□□□□ 0.41
HMGN1-219ENST00000491183 C19orf43Q9BQ61 176 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 TMEM121Q9BTD3 319 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 RAB33BQ9H082 229 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 WWP1Q9H0M0 922 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 ZNF768Q9H5H4 540 aaKnown RBP17.62■□□□□ 0.41
HMGN1-219ENST00000491183 FEZ2Q9UHY8 353 aaPredicted RBP17.62■□□□□ 0.41
HMGN1-219ENST00000491183 CFAP20Q9Y6A4 193 aaKnown RBP17.62■□□□□ 0.41
HMGN1-219ENST00000491183 LOC101059948A0A1B0GTJ6 334 aa17.61■□□□□ 0.41
HMGN1-219ENST00000491183 STK17BO94768 372 aa17.61■□□□□ 0.41
HMGN1-219ENST00000491183 MTHFD1P11586 935 aaKnown RBP17.61■□□□□ 0.41
HMGN1-219ENST00000491183 PLA2G2AP14555 144 aa17.61■□□□□ 0.41
HMGN1-219ENST00000491183 CDKN1CP49918 316 aaPredicted RBP17.61■□□□□ 0.41
HMGN1-219ENST00000491183 BCL7AQ4VC05 210 aa17.61■□□□□ 0.41
HMGN1-219ENST00000491183 FAM92BQ6ZTR7 304 aa17.61■□□□□ 0.41
HMGN1-219ENST00000491183 PRSS42Q7Z5A4 293 aa17.61■□□□□ 0.41
HMGN1-219ENST00000491183 NLGN4XQ8N0W4 816 aa17.61■□□□□ 0.41
HMGN1-219ENST00000491183 NXPE1Q8N323 547 aa17.61■□□□□ 0.41
HMGN1-219ENST00000491183 TXLNBQ8N3L3 684 aa17.61■□□□□ 0.41
HMGN1-219ENST00000491183 RNF10Q8N5U6 811 aaKnown RBP17.61■□□□□ 0.41
HMGN1-219ENST00000491183 LILRA3Q8N6C8 439 aaPredicted RBP17.61■□□□□ 0.41
HMGN1-219ENST00000491183 SPDYE1Q8NFV5 336 aaPredicted RBP17.61■□□□□ 0.41
HMGN1-219ENST00000491183 NLGN4YQ8NFZ3 816 aaPredicted RBP17.61■□□□□ 0.41
HMGN1-219ENST00000491183 OR2L2Q8NH16 312 aa17.61■□□□□ 0.41
HMGN1-219ENST00000491183 DNAJC1Q96KC8 554 aaKnown RBP17.61■□□□□ 0.41
HMGN1-219ENST00000491183 CRLS1Q9UJA2 301 aa17.61■□□□□ 0.41
HMGN1-219ENST00000491183 RASSF9O75901 435 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 DLGAP3O95886 979 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 ZNF28P17035 718 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 MAP4P27816 1152 aaKnown RBP17.6■□□□□ 0.41
HMGN1-219ENST00000491183 MC4RP32245 332 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 HADHAP40939 763 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 FOXM1Q08050 763 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 CACHD1Q5VU97 1274 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 IRGCQ6NXR0 463 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 DUS1LQ6P1R4 473 aaKnown RBP17.6■□□□□ 0.41
HMGN1-219ENST00000491183 SNX20Q7Z614 316 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 UNC5BQ8IZJ1 945 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 TAB3Q8N5C8 712 aaPredicted RBP17.6■□□□□ 0.41
HMGN1-219ENST00000491183 ATG4AQ8WYN0 398 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 ULK4Q96C45 1275 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 RNF31Q96EP0 1072 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 ZDHHC12Q96GR4 267 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 IMP3Q9NV31 184 aaKnown RBP17.6■□□□□ 0.41
HMGN1-219ENST00000491183 SEMA5BQ9P283 1151 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 FAM8A1Q9UBU6 413 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 ACSL5Q9ULC5 683 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 CFAP46Q8IYW2 2715 aa17.6■□□□□ 0.41
HMGN1-219ENST00000491183 TRBV5-4A0A0C4DH59 114 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 B8ZZF3 427 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 H7C0S8 307 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 POLBP06746 335 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 FAM87AP0C7U9 286 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 PRSS56P0CW18 603 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 ITGALP20701 1170 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 PRLHRP49683 370 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 CAPRIN2Q6IMN6 1127 aaKnown RBP17.59■□□□□ 0.41
HMGN1-219ENST00000491183 CFAP206Q8IYR0 622 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 LRRC45Q96CN5 670 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 DCUN1D1Q96GG9 259 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 C12orf66Q96MD2 445 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 OR6C1Q96RD1 312 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 COPS8Q99627 209 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 LRRC40Q9H9A6 602 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 NLE1Q9NVX2 485 aaPredicted RBP17.59■□□□□ 0.41
HMGN1-219ENST00000491183 PIH1D1Q9NWS0 290 aaKnown RBP17.59■□□□□ 0.41
HMGN1-219ENST00000491183 PIEZO2Q9H5I5 2752 aa17.59■□□□□ 0.41
HMGN1-219ENST00000491183 IGLV3-16A0A075B6K0 115 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 IGHV5-51A0A0C4DH38 117 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 KLHL33A6NCF5 533 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 AP2A1O95782 977 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 ATP1B2P14415 290 aaPredicted RBP17.58■□□□□ 0.4
HMGN1-219ENST00000491183 ITGB6P18564 788 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 NELFEP18615 380 aaKnown RBP17.58■□□□□ 0.4
HMGN1-219ENST00000491183 ABHD18Q0P651 414 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 POU6F1Q14863 301 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 P3H1Q32P28 736 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 GPR33Q49SQ1 333 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 HEXDCQ8WVB3 486 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 CDKN2AIPNLQ96HQ2 116 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 SLC45A3Q96JT2 553 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 RMDN2Q96LZ7 410 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 ARHGAP9Q9BRR9 750 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 GPN2Q9H9Y4 310 aaPredicted RBP17.58■□□□□ 0.4
HMGN1-219ENST00000491183 ZDHHC3Q9NYG2 299 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 IL17BQ9UHF5 180 aa17.58■□□□□ 0.4
HMGN1-219ENST00000491183 GUCA1BQ9UMX6 200 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms