RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 ZNF567Q8N184 647 aa15.2■□□□□ 0.02
COL2A1-207ENST00000490609 D2HGDHQ8N465 521 aa15.2■□□□□ 0.02
COL2A1-207ENST00000490609 SLC25A41Q8N5S1 370 aa15.2■□□□□ 0.02
COL2A1-207ENST00000490609 SPDYE1Q8NFV5 336 aaPredicted RBP15.2■□□□□ 0.02
COL2A1-207ENST00000490609 OR8K1Q8NGG5 319 aa15.2■□□□□ 0.02
COL2A1-207ENST00000490609 FAM153AQ9UHL3 310 aa15.2■□□□□ 0.02
COL2A1-207ENST00000490609 CFAP20Q9Y6A4 193 aaKnown RBP15.2■□□□□ 0.02
COL2A1-207ENST00000490609 MYO9AB2RTY4 2548 aa15.19■□□□□ 0.02
COL2A1-207ENST00000490609 OR2AG2A6NM03 316 aa15.19■□□□□ 0.02
COL2A1-207ENST00000490609 F5H423 210 aaPredicted RBP15.19■□□□□ 0.02
COL2A1-207ENST00000490609 MKRN2OSH3BPM6 223 aa15.19■□□□□ 0.02
COL2A1-207ENST00000490609 PPP1R12AO14974 1030 aaPredicted RBP15.19■□□□□ 0.02
COL2A1-207ENST00000490609 RFPL1O75677 317 aa15.19■□□□□ 0.02
COL2A1-207ENST00000490609 KRT1P04264 644 aa15.19■□□□□ 0.02
COL2A1-207ENST00000490609 CCNYL3P0C7X3 344 aa15.19■□□□□ 0.02
COL2A1-207ENST00000490609 RNF224P0DH78 156 aa15.19■□□□□ 0.02
COL2A1-207ENST00000490609 ZFXP17010 805 aaPredicted RBP15.19■□□□□ 0.02
COL2A1-207ENST00000490609 COMTP21964 271 aa15.19■□□□□ 0.02
COL2A1-207ENST00000490609 GPS2Q13227 327 aa15.19■□□□□ 0.02
COL2A1-207ENST00000490609 SLC1A5Q15758 541 aa15.19■□□□□ 0.02
COL2A1-207ENST00000490609 LILRA3Q8N6C8 439 aaPredicted RBP15.19■□□□□ 0.02
COL2A1-207ENST00000490609 BRSK1Q8TDC3 778 aa15.19■□□□□ 0.02
COL2A1-207ENST00000490609 ADAMTS17Q8TE56 1095 aa15.19■□□□□ 0.02
COL2A1-207ENST00000490609 UBXN4Q92575 508 aa15.19■□□□□ 0.02
COL2A1-207ENST00000490609 ZNF501Q96CX3 271 aaPredicted RBP15.19■□□□□ 0.02
COL2A1-207ENST00000490609 FCRL4Q96PJ5 515 aa15.19■□□□□ 0.02
COL2A1-207ENST00000490609 FCRL5Q96RD9 977 aa15.19■□□□□ 0.02
COL2A1-207ENST00000490609 MAK16Q9BXY0 300 aaKnown RBP15.19■□□□□ 0.02
COL2A1-207ENST00000490609 DNMT3AQ9Y6K1 912 aaPredicted RBP15.19■□□□□ 0.02
COL2A1-207ENST00000490609 BLACEA4D250 179 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 OR5K3A6NET4 321 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 C21orf140B9A014 251 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 CST8O60676 142 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 KCNJ13O60928 360 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 CAPN1P07384 714 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 MTHFD1P11586 935 aaKnown RBP15.18■□□□□ 0.02
COL2A1-207ENST00000490609 PTPN4P29074 926 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 SPAM1P38567 509 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 NR2C2P49116 596 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 KPNA2P52292 529 aaKnown RBP15.18■□□□□ 0.02
COL2A1-207ENST00000490609 CHAF1BQ13112 559 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 OLIG2Q13516 323 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 GPR19Q15760 415 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 UGT8Q16880 541 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 ZNF789Q5FWF6 425 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 TEX19Q8NA77 164 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 SIDT2Q8NBJ9 832 aaKnown RBP15.18■□□□□ 0.02
COL2A1-207ENST00000490609 GDAP1Q8TB36 358 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.18■□□□□ 0.02
COL2A1-207ENST00000490609 ZNF514Q96K75 400 aaPredicted RBP15.18■□□□□ 0.02
COL2A1-207ENST00000490609 SRPK1Q96SB4 655 aaKnown RBP15.18■□□□□ 0.02
COL2A1-207ENST00000490609 WWP1Q9H0M0 922 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 GOLPH3Q9H4A6 298 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 TRABDQ9H4I3 376 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 C10orf88Q9H8K7 445 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 PDE7BQ9NP56 450 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 FGF21Q9NSA1 209 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 RARRES3Q9UL19 164 aa15.18■□□□□ 0.02
COL2A1-207ENST00000490609 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.18■□□□□ 0.02
COL2A1-207ENST00000490609 GLYATL1P3A0A0U1RQE8 302 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 AGTP01019 485 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 MT-ND3P03897 115 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 TNNT1P13805 278 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 MARCKSL1P49006 195 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 XIAPP98170 497 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 NADK2Q4G0N4 442 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 ZNF658BQ4V348 819 aaPredicted RBP15.17■□□□□ 0.02
COL2A1-207ENST00000490609 LDLRAP1Q5SW96 308 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 PLEKHS1Q5SXH7 462 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 PAPD7Q5XG87 772 aaKnown RBP15.17■□□□□ 0.02
COL2A1-207ENST00000490609 CAPRIN2Q6IMN6 1127 aaKnown RBP15.17■□□□□ 0.02
COL2A1-207ENST00000490609 SPOCD1Q6ZMY3 1216 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 BLOC1S5Q8TDH9 187 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 TFB1MQ8WVM0 346 aaKnown RBP15.17■□□□□ 0.02
COL2A1-207ENST00000490609 GPR87Q9BY21 358 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 NHEJ1Q9H9Q4 299 aaPredicted RBP15.17■□□□□ 0.02
COL2A1-207ENST00000490609 ABHD10Q9NUJ1 306 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 SMOXQ9NWM0 555 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 HRASLS2Q9NWW9 162 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 SLC24A2Q9UI40 661 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 ARL5AQ9Y689 179 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 CNTRLQ7Z7A1 2325 aa15.17■□□□□ 0.02
COL2A1-207ENST00000490609 MGAT4DA6NG13 374 aa15.16■□□□□ 0.02
COL2A1-207ENST00000490609 TLCD2A6NGC4 264 aa15.16■□□□□ 0.02
COL2A1-207ENST00000490609 AGAP14A8MT82 685 aa15.16■□□□□ 0.02
COL2A1-207ENST00000490609 DDX3YO15523 660 aaKnown RBP15.16■□□□□ 0.02
COL2A1-207ENST00000490609 AKR1B10O60218 316 aa15.16■□□□□ 0.02
COL2A1-207ENST00000490609 CEACAM4O75871 244 aa15.16■□□□□ 0.02
COL2A1-207ENST00000490609 SORBS2O94875 1100 aaKnown RBP15.16■□□□□ 0.02
COL2A1-207ENST00000490609 LCA5LO95447 670 aa15.16■□□□□ 0.02
COL2A1-207ENST00000490609 VCLP18206 1134 aa15.16■□□□□ 0.02
COL2A1-207ENST00000490609 GNLYP22749 145 aa15.16■□□□□ 0.02
COL2A1-207ENST00000490609 ADRA1AP35348 466 aa15.16■□□□□ 0.02
COL2A1-207ENST00000490609 HALP42357 657 aa15.16■□□□□ 0.02
COL2A1-207ENST00000490609 ARCN1P48444 511 aaKnown RBP15.16■□□□□ 0.02
COL2A1-207ENST00000490609 HSD11B2P80365 405 aa15.16■□□□□ 0.02
COL2A1-207ENST00000490609 ABRQ12979 859 aa15.16■□□□□ 0.02
COL2A1-207ENST00000490609 GTF2H3Q13889 308 aa15.16■□□□□ 0.02
COL2A1-207ENST00000490609 CCDC70Q6NSX1 233 aa15.16■□□□□ 0.02
COL2A1-207ENST00000490609 DET1Q7L5Y6 550 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms