RNA–Protein interactions for RNA: ENST00000490540.1

ASIC3-208, Transcript of acid sensing ion channel subunit 3, human

TSL 2

Gene ASIC3, Length 520 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ASIC3-208	ENST00000490540	C9orf72	Q96LT7	481 aa		11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	TBL1Y	Q9BQ87	522 aa		11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	FERMT1	Q9BQL6	677 aa		11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	ASPSCR1	Q9BZE9	553 aa		11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	EPN3	Q9H201	632 aa		11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	EPB41L1	Q9H4G0	881 aa		11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	ASB8	Q9H765	288 aa		11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	UCK1	Q9HA47	277 aa		11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	WASH6P	Q9NQA3	447 aa		11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	IMP3	Q9NV31	184 aa	Known RBP	11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	SMOX	Q9NWM0	555 aa		11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	PILRA	Q9UKJ1	303 aa		11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	AMFR	Q9UKV5	643 aa		11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	AAR2	Q9Y312	384 aa	Known RBP	11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	CFAP20	Q9Y6A4	193 aa	Known RBP	11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	CAPN6	Q9Y6Q1	641 aa		11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	TLN1	Q9Y490	2541 aa	Known RBP	11.75	□□□□□ -0.53
ASIC3-208	ENST00000490540	C2orf81	A6NN90	581 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	RASSF9	O75901	435 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	SRP72	O76094	671 aa	Known RBP	11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	STK17B	O94768	372 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	METTL18	O95568	372 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	C9	P02748	559 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	PTMA	P06454	111 aa	Known RBP	11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	ANKRD34C	P0C6C1	535 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	PRSS56	P0CW18	603 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	ZNF28	P17035	718 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	MSH3	P20585	1137 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	CAPZB	P47756	277 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	GDF10	P55107	478 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	POLE2	P56282	527 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	XIAP	P98170	497 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	FOXM1	Q08050	763 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	DMPK	Q09013	629 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	KIF5A	Q12840	1032 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	IRGC	Q6NXR0	463 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	LILRA3	Q8N6C8	439 aa	Predicted RBP	11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	CALR3	Q96L12	384 aa	Known RBP	11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	SLC12A9	Q9BXP2	914 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	SPRY4	Q9C004	299 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	WWP1	Q9H0M0	922 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	PIH1D1	Q9NWS0	290 aa	Known RBP	11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	CRLS1	Q9UJA2	301 aa		11.74	□□□□□ -0.53
ASIC3-208	ENST00000490540	LOC101059948	A0A1B0GTJ6	334 aa		11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	C5orf60	A6NFR6	353 aa		11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	POLR1C	O15160	346 aa	Predicted RBP	11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	SGTA	O43765	313 aa		11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	TPH1	P17752	444 aa		11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	CDKN1C	P49918	316 aa	Predicted RBP	11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	ZNF140	P52738	457 aa	Predicted RBP	11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	KCNAB2	Q13303	367 aa		11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	KLF1	Q13351	362 aa	Predicted RBP	11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	LONRF2	Q1L5Z9	754 aa		11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	CEACAM20	Q6UY09	585 aa		11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	ARHGEF18	Q6ZSZ5	1173 aa		11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	NLGN4X	Q8N0W4	816 aa		11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	UBL4B	Q8N7F7	174 aa		11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	ATG4A	Q8WYN0	398 aa		11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	DNAJC1	Q96KC8	554 aa	Known RBP	11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	TEFM	Q96QE5	360 aa	Known RBP	11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	INSM2	Q96T92	566 aa	Predicted RBP	11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	ADNP	Q9H2P0	1102 aa		11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	FBXO8	Q9NRD0	319 aa		11.73	□□□□□ -0.53
ASIC3-208	ENST00000490540	BSN	Q9UPA5	3926 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	CCDC78	A2IDD5	438 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	GOLGA6L9	A6NEM1	432 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	MGAT4D	A6NG13	374 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	MIF4GD	A9UHW6	222 aa	Known RBP	11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	LDB2	O43679	373 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	KCNJ13	O60928	360 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	CRTAM	O95727	393 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	DLGAP3	O95886	979 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	NTRK1	P04629	796 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	POLB	P06746	335 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	MTHFD1	P11586	935 aa	Known RBP	11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	CDC25B	P30305	580 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	MC4R	P32245	332 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	CCR10	P46092	362 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	SEPT6	Q14141	434 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	KCNAB1	Q14722	419 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	POU6F1	Q14863	301 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	PLCL1	Q15111	1095 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	CACHD1	Q5VU97	1274 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	KCTD11	Q693B1	232 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	CERS6	Q6ZMG9	384 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	RBM12B	Q8IXT5	1001 aa	Known RBP	11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	KLHDC8B	Q8IXV7	354 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	SYCE1	Q8N0S2	351 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	NXPE1	Q8N323	547 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	RMDN2	Q96LZ7	410 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	C12orf66	Q96MD2	445 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	OR6C1	Q96RD1	312 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	TMEM121	Q9BTD3	319 aa		11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	ZNF768	Q9H5H4	540 aa	Known RBP	11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.72	□□□□□ -0.53
ASIC3-208	ENST00000490540	ZNF71	Q9NQZ8	489 aa	Predicted RBP	11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms