RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 HDAC11Q96DB2 347 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 SNRNP40Q96DI7 357 aaKnown RBP8.01□□□□□ -1.13
USP39-216ENST00000490193 C5orf34Q96MH7 638 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 BARD1Q99728 777 aaKnown RBP8.01□□□□□ -1.13
USP39-216ENST00000490193 MAP3K3Q99759 626 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 ZNF670Q9BS34 389 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 NLNQ9BYT8 704 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 CHST8Q9H2A9 424 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 HSD3B7Q9H2F3 369 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 HAUS4Q9H6D7 363 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 KCND1Q9NSA2 647 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 GPR83Q9NYM4 423 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 LUZP4Q9P127 313 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 TMEM63CQ9P1W3 806 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 MYO1AQ9UBC5 1043 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 TCFL5Q9UL49 500 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 TMPRSS11EQ9UL52 423 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 BTRCQ9Y297 605 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 TTLL3Q9Y4R7 772 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 SPTBP11277 2137 aa8□□□□□ -1.13
USP39-216ENST00000490193 PDZD2O15018 2839 aa8□□□□□ -1.13
USP39-216ENST00000490193 FER1L5A0AVI2 2057 aa8□□□□□ -1.13
USP39-216ENST00000490193 PIKFYVEQ9Y2I7 2098 aa8□□□□□ -1.13
USP39-216ENST00000490193 LOC100996750A0A140TA64 210 aa8□□□□□ -1.13
USP39-216ENST00000490193 MEN1O00255 615 aa8□□□□□ -1.13
USP39-216ENST00000490193 MTX2O75431 263 aa8□□□□□ -1.13
USP39-216ENST00000490193 ZBTB11O95625 1053 aaPredicted RBP8□□□□□ -1.13
USP39-216ENST00000490193 KLK3P07288 261 aaPredicted RBP8□□□□□ -1.13
USP39-216ENST00000490193 MSL3P1P0C860 447 aa8□□□□□ -1.13
USP39-216ENST00000490193 BPIP17213 487 aa8□□□□□ -1.13
USP39-216ENST00000490193 MX2P20592 715 aa8□□□□□ -1.13
USP39-216ENST00000490193 ITGA1P56199 1179 aa8□□□□□ -1.13
USP39-216ENST00000490193 IFI35P80217 286 aaPredicted RBP8□□□□□ -1.13
USP39-216ENST00000490193 TMEM115Q12893 351 aaPredicted RBP8□□□□□ -1.13
USP39-216ENST00000490193 GALNT3Q14435 633 aa8□□□□□ -1.13
USP39-216ENST00000490193 NR6A1Q15406 480 aa8□□□□□ -1.13
USP39-216ENST00000490193 SLC14A2Q15849 920 aa8□□□□□ -1.13
USP39-216ENST00000490193 ASIC2Q16515 512 aa8□□□□□ -1.13
USP39-216ENST00000490193 RPE65Q16518 533 aa8□□□□□ -1.13
USP39-216ENST00000490193 CRB2Q5IJ48 1285 aa8□□□□□ -1.13
USP39-216ENST00000490193 DNTTIP2Q5QJE6 756 aaKnown RBP8□□□□□ -1.13
USP39-216ENST00000490193 PLEKHS1Q5SXH7 462 aa8□□□□□ -1.13
USP39-216ENST00000490193 VWA5B1Q5TIE3 1220 aa8□□□□□ -1.13
USP39-216ENST00000490193 ALS2CLQ60I27 953 aa8□□□□□ -1.13
USP39-216ENST00000490193 E4F1Q66K89 784 aaPredicted RBP8□□□□□ -1.13
USP39-216ENST00000490193 IGFL3Q6UXB1 125 aa8□□□□□ -1.13
USP39-216ENST00000490193 CERS6Q6ZMG9 384 aa8□□□□□ -1.13
USP39-216ENST00000490193 TRAPPC5Q8IUR0 188 aa8□□□□□ -1.13
USP39-216ENST00000490193 TMEM126BQ8IUX1 230 aa8□□□□□ -1.13
USP39-216ENST00000490193 ZBTB2Q8N680 514 aa8□□□□□ -1.13
USP39-216ENST00000490193 CNTD1Q8N815 330 aa8□□□□□ -1.13
USP39-216ENST00000490193 ENDOVQ8N8Q3 282 aaKnown RBP8□□□□□ -1.13
USP39-216ENST00000490193 DTX3LQ8TDB6 740 aa8□□□□□ -1.13
USP39-216ENST00000490193 BRSK1Q8TDC3 778 aa8□□□□□ -1.13
USP39-216ENST00000490193 ZFPM2Q8WW38 1151 aa8□□□□□ -1.13
USP39-216ENST00000490193 CPT1BQ92523 772 aa8□□□□□ -1.13
USP39-216ENST00000490193 TADA1Q96BN2 335 aa8□□□□□ -1.13
USP39-216ENST00000490193 C19orf60Q96EN9 201 aa8□□□□□ -1.13
USP39-216ENST00000490193 SRPK1Q96SB4 655 aaKnown RBP8□□□□□ -1.13
USP39-216ENST00000490193 KRTAP4-6Q9BYQ5 205 aa8□□□□□ -1.13
USP39-216ENST00000490193 SYTL2Q9HCH5 934 aa8□□□□□ -1.13
USP39-216ENST00000490193 ASF1BQ9NVP2 202 aa8□□□□□ -1.13
USP39-216ENST00000490193 IP6K2Q9UHH9 426 aa8□□□□□ -1.13
USP39-216ENST00000490193 SNX7Q9UNH6 387 aa8□□□□□ -1.13
USP39-216ENST00000490193 B3GNT3Q9Y2A9 372 aa8□□□□□ -1.13
USP39-216ENST00000490193 ZNF711Q9Y462 761 aa8□□□□□ -1.13
USP39-216ENST00000490193 DNMT3AQ9Y6K1 912 aaPredicted RBP8□□□□□ -1.13
USP39-216ENST00000490193 CROCCQ5TZA2 2017 aa8□□□□□ -1.13
USP39-216ENST00000490193 SEC16AO15027 2179 aa8□□□□□ -1.13
USP39-216ENST00000490193 CELSR1Q9NYQ6 3014 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 UBA6A0AVT1 1052 aaPredicted RBP7.99□□□□□ -1.13
USP39-216ENST00000490193 ANKUB1A6NFN9 424 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 ZNF185O15231 689 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 KRT86O43790 486 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 ARL4DP49703 201 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 GBE1Q04446 702 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 PPIDQ08752 370 aaKnown RBP7.99□□□□□ -1.13
USP39-216ENST00000490193 KLHL30Q0D2K2 578 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 GPR19Q15760 415 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 HADHQ16836 314 aaKnown RBP7.99□□□□□ -1.13
USP39-216ENST00000490193 PLEKHN1Q494U1 663 aaPredicted RBP7.99□□□□□ -1.13
USP39-216ENST00000490193 ATP13A5Q4VNC0 1218 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 ZNF789Q5FWF6 425 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 TMTC4Q5T4D3 741 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 LCN10Q6JVE6 187 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 FAM198BQ6UWH4 519 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 AMZ2Q86W34 360 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 OOSP2Q86WS3 158 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 CYP4X1Q8N118 509 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 IMP4Q96G21 291 aaKnown RBP7.99□□□□□ -1.13
USP39-216ENST00000490193 IP6K3Q96PC2 410 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 RANBP9Q96S59 729 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 DPH2Q9BQC3 489 aaPredicted RBP7.99□□□□□ -1.13
USP39-216ENST00000490193 GPR63Q9BZJ6 419 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 PCMTD2Q9NV79 361 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 HRASLS2Q9NWW9 162 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 TRIM10Q9UDY6 481 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 ANAPC7Q9UJX3 599 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 SHOC2Q9UQ13 582 aa7.99□□□□□ -1.13
USP39-216ENST00000490193 DIDO1Q9BTC0 2240 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms