RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 C2orf81A6NN90 581 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 PDZK1P1A8MUH7 402 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 F5H423 210 aaPredicted RBP9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 TERTO14746 1132 aaKnown RBP9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 POLR1CO15160 346 aaPredicted RBP9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 FLNBO75369 2602 aaKnown RBP9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 STK17BO94768 372 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 PRAMEF1O95521 474 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 CRTAMO95727 393 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 FGF5P12034 268 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 LIFP15018 202 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 CETN2P41208 172 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 TNNT3P45378 269 aaPredicted RBP9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 CAPZBP47756 277 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 LEPRP48357 1165 aaKnown RBP9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 ATP1A2P50993 1020 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 DRG2P55039 364 aaKnown RBP9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 PDE1BQ01064 536 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 ABHD18Q0P651 414 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 GTF2H3Q13889 308 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 PRPSAP1Q14558 356 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 LONRF2Q1L5Z9 754 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 PLA2G4EQ3MJ16 856 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 DARS2Q6PI48 645 aaKnown RBP9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 TMEM220Q6QAJ8 160 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 PEX26Q7Z412 305 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 ZNF605Q86T29 641 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 FAM129CQ86XR2 697 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 SPNS2Q8IVW8 549 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 CACNA2D3Q8IZS8 1091 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 NLGN4XQ8N0W4 816 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 RNF10Q8N5U6 811 aaKnown RBP9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 BEND7Q8N7W2 519 aaPredicted RBP9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 ZSCAN1Q8NBB4 408 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 NLGN4YQ8NFZ3 816 aaPredicted RBP9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 OR2L2Q8NH16 312 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 GDAP1Q8TB36 358 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 RSC1A1Q92681 617 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 EXTL1Q92935 676 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 SLC41A2Q96JW4 573 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 TTC25Q96NG3 672 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 FAM118BQ9BPY3 351 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 APOL2Q9BQE5 337 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 TRIT1Q9H3H1 467 aaKnown RBP9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 TRIM10Q9UDY6 481 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 AMFRQ9UKV5 643 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 SEC16AO15027 2179 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 C17orf113A0A1B0GUU1 675 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 TCRBV7S2A1N4TA0A589 114 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 MROH6A6NGR9 719 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 KIF1CO43896 1103 aaKnown RBP9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 STK10O94804 968 aaKnown RBP9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 METTL18O95568 372 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 MTHFD1P11586 935 aaKnown RBP9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 SFTPCP11686 197 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 ZNF28P17035 718 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 AMD1P17707 334 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 NELFEP18615 380 aaKnown RBP9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 HALP42357 657 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 CYP4F2P78329 520 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 KIF5AQ12840 1032 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 NFE2L1Q14494 772 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 SEPT7Q16181 437 aaKnown RBP9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 GPR33Q49SQ1 333 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 SNAP47Q5SQN1 464 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 CCDC181Q5TID7 509 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 SNX20Q7Z614 316 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 LAPTM4BQ86VI4 370 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 TRIM48Q8IWZ4 208 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 SYCE1Q8N0S2 351 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 NXPE1Q8N323 547 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 IL22RA1Q8N6P7 574 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 GPR150Q8NGU9 434 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 JPH3Q8WXH2 748 aaPredicted RBP9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 CXorf40BQ96DE9 158 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 ZDHHC12Q96GR4 267 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 TGM7Q96PF1 710 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 FCRL4Q96PJ5 515 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 INSM2Q96T92 566 aaPredicted RBP9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 CTRCQ99895 268 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 TWSG1Q9GZX9 223 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 ASB8Q9H765 288 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 GEMIN8Q9NWZ8 242 aaKnown RBP9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 FKBPLQ9UIM3 349 aa9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 R3HDM2Q9Y2K5 976 aaKnown RBP9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 ZNF106Q9H2Y7 1883 aaKnown RBP9.51□□□□□ -0.89
TMEM39A-210ENST00000490099 LOC101059948A0A1B0GTJ6 334 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 OR2AG2A6NM03 316 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 SMAPO00193 183 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 AP2A1O95782 977 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 RECKO95980 971 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 STIP1P31948 543 aaKnown RBP9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 HADHAP40939 763 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 STAT5AP42229 794 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 MAPK9P45984 424 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 PRLHRP49683 370 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 GDF10P55107 478 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 NAP1L1P55209 391 aaKnown RBP9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 SH3BP2P78314 561 aa9.5□□□□□ -0.89
TMEM39A-210ENST00000490099 SPARCL1Q14515 664 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms