RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 PPHLN1Q8NEY8 458 aaKnown RBP3.38□□□□□ -1.87
HMGN1-218ENST00000490032 KCNG4Q8TDN1 519 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 MOCOSQ96EN8 888 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 GMPPAQ96IJ6 420 aaPredicted RBP3.38□□□□□ -1.87
HMGN1-218ENST00000490032 C1orf74Q96LT6 269 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 SLC22A12Q96S37 553 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 TRIM15Q9C019 465 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 PELI2Q9HAT8 420 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 ECHDC1Q9NTX5 307 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 ATAD3AQ9NVI7 634 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 PTTG2Q9NZH5 202 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 EHD2Q9NZN4 543 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 PAK5Q9P286 719 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 FRMD6-AS1P0C7T7 363 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 CBLP22681 906 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 KRT2P35908 639 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 BMXP51813 675 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 KCNJ10P78508 379 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 PPARDQ03181 441 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 EIF4A2Q14240 407 aaKnown RBP3.37□□□□□ -1.87
HMGN1-218ENST00000490032 TSTQ16762 297 aaKnown RBP3.37□□□□□ -1.87
HMGN1-218ENST00000490032 MEP1AQ16819 746 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 RARS2Q5T160 578 aaKnown RBP3.37□□□□□ -1.87
HMGN1-218ENST00000490032 ZDHHC20Q5W0Z9 365 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 JADE1Q6IE81 842 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 CFAP77Q6ZQR2 320 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 GALNT13Q8IUC8 556 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 ZNF611Q8N823 705 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 PCYOX1LQ8NBM8 494 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 ZKSCAN4Q969J2 545 aaPredicted RBP3.37□□□□□ -1.87
HMGN1-218ENST00000490032 SEC62Q99442 399 aaKnown RBP3.37□□□□□ -1.87
HMGN1-218ENST00000490032 MBNL1Q9NR56 388 aaKnown RBP3.37□□□□□ -1.87
HMGN1-218ENST00000490032 SETD4Q9NVD3 440 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 GTF2A1LQ9UNN4 478 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 MTMR6Q9Y217 621 aa3.37□□□□□ -1.87
HMGN1-218ENST00000490032 PCNX3Q9H6A9 2034 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 H7C423 109 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 DCXO43602 365 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 RTN3O95197 1032 aaPredicted RBP3.36□□□□□ -1.87
HMGN1-218ENST00000490032 AGR2O95994 175 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 TPOP07202 933 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 HSPA1AP0DMV8 641 aaKnown RBP3.36□□□□□ -1.87
HMGN1-218ENST00000490032 HSPA1BP0DMV9 641 aaKnown RBP3.36□□□□□ -1.87
HMGN1-218ENST00000490032 DPEP1P16444 411 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 TMEM11P17152 192 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 CKMT2P17540 419 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 CTU2Q2VPK5 515 aaKnown RBP3.36□□□□□ -1.87
HMGN1-218ENST00000490032 DENND5BQ6ZUT9 1274 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 GALNT5Q7Z7M9 940 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 SMC5Q8IY18 1101 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 CRYBG2Q8N1P7 616 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 SCML4Q8N228 414 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 MRGPRDQ8TDS7 321 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 MORC4Q8TE76 937 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 SEMA4DQ92854 862 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 GIMAP5Q96F15 307 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 DACH2Q96NX9 599 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 OR2A14Q96R47 310 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 NUDCD1Q96RS6 583 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 RBM4BQ9BQ04 359 aaKnown RBP3.36□□□□□ -1.87
HMGN1-218ENST00000490032 MCRIP2Q9BUT9 160 aaKnown RBP3.36□□□□□ -1.87
HMGN1-218ENST00000490032 DENND2DQ9H6A0 471 aaPredicted RBP3.36□□□□□ -1.87
HMGN1-218ENST00000490032 C9orf78Q9NZ63 289 aaPredicted RBP3.36□□□□□ -1.87
HMGN1-218ENST00000490032 RABGAP1Q9Y3P9 1069 aa3.36□□□□□ -1.87
HMGN1-218ENST00000490032 TDRD15B5MCY1 1934 aaKnown RBP3.36□□□□□ -1.87
HMGN1-218ENST00000490032 MYH15Q9Y2K3 1946 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 IGHV4-61A0A0C4DH41 118 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 LIPT2A6NK58 231 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 A8MZ25 164 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 AP2A2O94973 939 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 DDX58O95786 925 aaKnown RBP3.35□□□□□ -1.87
HMGN1-218ENST00000490032 NGFP01138 241 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 IGHV4-59P01825 116 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 H1F0P07305 194 aaKnown RBP3.35□□□□□ -1.87
HMGN1-218ENST00000490032 CEBPBP17676 345 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 TYMPP19971 482 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 ZNF10P21506 573 aaPredicted RBP3.35□□□□□ -1.87
HMGN1-218ENST00000490032 SP100P23497 879 aaPredicted RBP3.35□□□□□ -1.87
HMGN1-218ENST00000490032 MRPS5P82675 430 aaKnown RBP3.35□□□□□ -1.87
HMGN1-218ENST00000490032 MED22Q15528 200 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 GTDC1Q4AE62 458 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 TMEM198Q66K66 360 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 KLC3Q6P597 504 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 BHLHB9Q6PI77 547 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 SARM1Q6SZW1 724 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 METTL7BQ6UX53 244 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 TMTC3Q6ZXV5 915 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 CPLX4Q7Z7G2 160 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 ZNF843Q8N446 348 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 ELMOD3Q96FG2 381 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 C7orf26Q96N11 449 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 DCTN5Q9BTE1 182 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 UBXN6Q9BZV1 441 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 MUC13Q9H3R2 512 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 SLA2Q9H6Q3 261 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 OLFML3Q9NRN5 406 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 MIOSQ9NXC5 875 aa3.35□□□□□ -1.87
HMGN1-218ENST00000490032 KLHL8Q9P2G9 620 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms