RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 HELZP42694 1942 aaKnown RBP9.44□□□□□ -0.9
RAB3GAP1-205ENST00000489858 C1orf232A0A0U1RR37 186 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 CXorf51AA0A1B0GTR3 108 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 DYTNA2CJ06 578 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 PRORSD1PA6NEY8 169 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 AQP12BA6NM10 295 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 H0YJX3 145 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 SCAMP3O14828 347 aaKnown RBP9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 HTRA2O43464 458 aaPredicted RBP9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 DENRO43583 198 aaKnown RBP9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 GREM1O60565 184 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 EFCAB14O75071 495 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 RNASEH2AO75792 299 aaKnown RBP9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 GLUD1P00367 558 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 MYCP01106 439 aaPredicted RBP9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 LRG1P02750 347 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 CAPNS1P04632 268 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 CYBBP04839 570 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 CELA2BP08218 269 aaPredicted RBP9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 ALPIP09923 528 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 ZCCHC18P0CG32 403 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 HSD17B1P14061 328 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 PFKLP17858 780 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 DGKAP23743 735 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 SPAM1P38567 509 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 AGTR2P50052 363 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 ERVK-8P63133 956 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 CYP4F8P98187 520 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 PCBP2Q15366 365 aaKnown RBP eCLIP9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 TGFBIQ15582 683 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 EML3Q32P44 896 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 GPR33Q49SQ1 333 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 C6orf10Q5SRN2 563 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 MPP7Q5T2T1 576 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 IL23RQ5VWK5 629 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 TXNDC8Q6A555 127 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 FAM117BQ6P1L5 589 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 FAM151BQ6UXP7 276 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 HOMEZQ8IX15 550 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 AQP12AQ8IXF9 295 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 LILRA2Q8N149 483 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 ELMOD1Q8N336 334 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 ZBTB2Q8N680 514 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 TMEM102Q8N9M5 508 aaPredicted RBP9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 GOLM1Q8NBJ4 401 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 PDPRQ8NCN5 879 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 OR2T34Q8NGX1 318 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 OR2T3Q8NH03 318 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 WFDC5Q8TCV5 224 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 AUTS2Q8WXX7 1259 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 ATP6V1E2Q96A05 226 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 UHRF1Q96T88 793 aaPredicted RBP9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 FAM126AQ9BYI3 521 aaPredicted RBP9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 BRINP2Q9C0B6 783 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 RNF208Q9H0X6 261 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 PCDHAC1Q9H158 963 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 ASB8Q9H765 288 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 ZFYVE1Q9HBF4 777 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 TMEM39AQ9NV64 488 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 CRLS1Q9UJA2 301 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 LEF1Q9UJU2 399 aaPredicted RBP9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 ATP11BQ9Y2G3 1177 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 AP4B1Q9Y6B7 739 aa9.43□□□□□ -0.9
RAB3GAP1-205ENST00000489858 SRCAPQ6ZRS2 3230 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 TRBV5-4A0A0C4DH59 114 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 GLYATL1P3A0A0U1RQE8 302 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 A0A1W2PP18 115 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 FAM234BA2RU67 622 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 ZNF839A8K0R7 811 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 E2F3O00716 465 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 NME4O00746 187 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 TEX28O15482 410 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 AP1G1O43747 822 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 DNAJA2O60884 412 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 EEDO75530 441 aaKnown RBP9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 OR4F21O95013 312 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 OTCP00480 354 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 ATP6V1B2P21281 511 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 ACRV1P26436 265 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 HMOX2P30519 316 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 GPC1P35052 558 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 CA8P35219 290 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 ARL1P40616 181 aaPredicted RBP9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 SNRPD1P62314 119 aaKnown RBP9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 LMAN2Q12907 356 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 NFYCQ13952 458 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 RCAN2Q14206 197 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 PTPRRQ15256 657 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 CRY1Q16526 586 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 ATP6AP1LQ52LC2 224 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 C1orf53Q5VUE5 145 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 FAM219BQ5XKK7 198 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 LCN8Q6JVE9 175 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 FBXL19Q6PCT2 694 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 UGT2A3Q6UWM9 527 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 TPGS1Q6ZTW0 290 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 CCDC149Q6ZUS6 474 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 HTR3DQ70Z44 454 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 PRICKLE2Q7Z3G6 844 aa9.42□□□□□ -0.9
RAB3GAP1-205ENST00000489858 GOLGA7Q7Z5G4 137 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms