RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 STARD3NLO95772 234 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 LSM8O95777 96 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 WDPCPO95876 746 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 ALPPP05187 535 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 ADRB2P07550 413 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 APRTP07741 180 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 MLNP12872 115 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 IFI30P13284 250 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF250P15622 560 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 TNNI3P19429 210 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 F8A1P23610 371 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 IL1R2P27930 398 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 ALDH4A1P30038 563 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SPRP35270 261 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 HMGCLP35914 325 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 ISL1P61371 349 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 ERVK-21P61565 698 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 GTF2BQ00403 316 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 TEKQ02763 1124 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC25A11Q02978 314 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 MLLT1Q03111 559 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 GABPAQ06546 454 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 PIGFQ07326 219 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 CD47Q08722 323 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF543Q08ER8 600 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 IL18R1Q13478 541 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 LAPTM5Q13571 262 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 CLCA4Q14CN2 919 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 PON2Q15165 354 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SNRNP35Q16560 246 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 CTU2Q2VPK5 515 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 HSDL1Q3SXM5 330 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SETMARQ53H47 684 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SPANXN2Q5MJ10 180 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 CACHD1Q5VU97 1274 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 LAIR2Q6ISS4 152 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 TIGD7Q6NT04 549 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 USP17L6PQ6QN14 398 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF782Q6ZMW2 699 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SV2AQ7L0J3 742 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 PTRH1Q86Y79 214 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SLITRK4Q8IW52 837 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 CLEC4FQ8N1N0 589 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 PLD6Q8N2A8 252 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 AADATQ8N5Z0 425 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 PLD5Q8N7P1 536 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 GLB1L3Q8NCI6 653 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC44A5Q8NCS7 719 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 OR8K5Q8NH50 307 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 HMGCLL1Q8TB92 370 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC22A8Q8TCC7 542 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SPPL2BQ8TCT7 592 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 BPIFB1Q8TDL5 484 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 FBLIM1Q8WUP2 373 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 POMGNT1Q8WZA1 660 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC38A4Q969I6 547 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SCYL1Q96KG9 808 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 UROC1Q96N76 676 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 MCEEQ96PE7 176 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 FYTTD1Q96QD9 318 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 CPNE1Q99829 537 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 WACQ9BTA9 647 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 NAT9Q9BTE0 207 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 UGT2B28Q9BY64 529 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF518BQ9C0D4 1074 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 C6orf62Q9GZU0 229 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC6A17Q9H1V8 727 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC6A15Q9H2J7 730 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SMOC2Q9H3U7 446 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 TOR3AQ9H497 397 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 DUSP21Q9H596 190 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 LRRC4Q9HBW1 653 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 IFT46Q9NQC8 304 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 MTMR10Q9NXD2 777 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 USE1Q9NZ43 259 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 NUFIP1Q9UHK0 495 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 GPN3Q9UHW5 284 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 GLS2Q9UI32 602 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 GGA1Q9UJY5 639 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 TRHDEQ9UKU6 1024 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 PNMA8BQ9ULN7 279 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 TBC1D24Q9ULP9 559 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 CNTN6Q9UQ52 1028 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 TPRKBQ9Y3C4 175 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 LYVE1Q9Y5Y7 322 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 HSPE1-MOB4S4R3N1 261 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 COL24A1Q17RW2 1714 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 SCN7AQ01118 1682 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 TISP43B9A030 160 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 F8W810 466 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 UBXN8O00124 270 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 NFKBIEO00221 500 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 INPP4BO15327 924 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 KCNN4O15554 427 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 AKR7A2O43488 359 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 SH3BP5O60239 455 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 NPHS1O60500 1241 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 RNGTTO60942 597 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 PTP4A3O75365 173 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ENDOD1O94919 500 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms