RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 HSD17B3P37058 310 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 GPR3P46089 330 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 INHBCP55103 352 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 EIF3BP55884 814 aaKnown RBP10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 MAZP56270 477 aaKnown RBP10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 XIAPP98170 497 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 SEPT6Q14141 434 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 FRG1Q14331 258 aaKnown RBP10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 NR1D2Q14995 579 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 SLMAPQ14BN4 828 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 CLPPQ16740 277 aaPredicted RBP10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 LRIG3Q6UXM1 1119 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 TRMT10CQ7L0Y3 403 aaKnown RBP10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 GLT6D1Q7Z4J2 308 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 ZNF438Q7Z4V0 828 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 PDZD3Q86UT5 571 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 SFTPA2Q8IWL1 248 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 ARL14Q8N4G2 192 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 TRAM1L1Q8N609 369 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 GPR26Q8NDV2 337 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 PPHLN1Q8NEY8 458 aaKnown RBP10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 PYROXD1Q8WU10 500 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 DNAJC1Q96KC8 554 aaKnown RBP10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 SLC46A1Q96NT5 459 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 C19orf43Q9BQ61 176 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 SPATA16Q9BXB7 569 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 TRABDQ9H4I3 376 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 ASCL3Q9NQ33 180 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 SMYD2Q9NRG4 433 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 NLE1Q9NVX2 485 aaPredicted RBP10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 MOCS1Q9NZB8 636 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 HACD3Q9P035 362 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 ZC3H7BQ9UGR2 993 aaKnown RBP10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 ZNHIT2Q9UHR6 403 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 ST14Q9Y5Y6 855 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 MAD1L1Q9Y6D9 718 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 OAS3Q9Y6K5 1087 aaKnown RBP10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 FAM169AQ9Y6X4 670 aa10.41□□□□□ -0.74
SCAMP4-208ENST00000489554 CFAP47Q6ZTR5 3102 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 A0A1W2PNU3 283 aaPredicted RBP10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 TCRBV9S1A1TA0A576 114 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 MAGEB16A2A368 324 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 H7C0S8 307 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 PLD2O14939 933 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 CASC3O15234 703 aaKnown RBP10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 DNAJC6O75061 913 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 SASH3O75995 380 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 ACSL3O95573 720 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 CPNE6O95741 557 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 SLC4A1P02730 911 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 ITGA2BP08514 1039 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 ABHD2P08910 425 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 BPIP17213 487 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 LPOP22079 712 aaPredicted RBP10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 ITPKBP27987 946 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 OAS2P29728 719 aaKnown RBP10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 B4GALNT1Q00973 533 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 ZDHHC20Q5W0Z9 365 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 KIAA0930Q6ICG6 404 aaPredicted RBP10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 CASC4Q6P4E1 433 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 CAPN12Q6ZSI9 719 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 B3GNT8Q7Z7M8 397 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 PHYKPLQ8IUZ5 450 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 NAGSQ8N159 534 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 OR4K2Q8NGD2 314 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 PEX13Q92968 403 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 GLYATL1Q969I3 302 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 TMEM159Q96B96 161 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 ZNF669Q96BR6 464 aaPredicted RBP10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 CCDC97Q96F63 343 aaPredicted RBP10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 CFAP36Q96G28 342 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 PRR11Q96HE9 360 aaPredicted RBP10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 PLEKHG4BQ96PX9 1271 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 NAT9Q9BTE0 207 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 IL1RAPL1Q9NZN1 696 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 SLC17A6Q9P2U8 582 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 RALYQ9UKM9 306 aaKnown RBP10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 PLEKHM1Q9Y4G2 1056 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 NFS1Q9Y697 457 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 RPS6KL1Q9Y6S9 549 aa10.4□□□□□ -0.74
SCAMP4-208ENST00000489554 COL27A1Q8IZC6 1860 aaPredicted RBP10.4□□□□□ -0.75
SCAMP4-208ENST00000489554 RP1P56715 2156 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 OR51F1A6NGY5 319 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 FAM159BA6NKW6 160 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 CDRT15L2A8MXV6 281 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 CXorf49A8MYA2 514 aaPredicted RBP10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 GRID2O43424 1007 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 B4GAT1O43505 415 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 NUAK1O60285 661 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 PIAS1O75925 651 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 TNFSF15O95150 251 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 SLC25A14O95258 325 aaPredicted RBP10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 CRTAMO95727 393 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 SHBGP04278 402 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 POLBP06746 335 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 GSTA2P09210 222 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 PRSS56P0CW18 603 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 SLC2A4P14672 509 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 GCAP28676 217 aa10.39□□□□□ -0.75
SCAMP4-208ENST00000489554 ALDH4A1P30038 563 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms