RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 CTBP1Q13363 440 aa14.14□□□□□ -0.15
HLA-F-229ENST00000489502 BIRC2Q13490 618 aa14.14□□□□□ -0.15
HLA-F-229ENST00000489502 BOP1Q14137 746 aaKnown RBP14.14□□□□□ -0.15
HLA-F-229ENST00000489502 CTSL3PQ5NE16 218 aa14.14□□□□□ -0.15
HLA-F-229ENST00000489502 DUS1LQ6P1R4 473 aaKnown RBP14.14□□□□□ -0.15
HLA-F-229ENST00000489502 C17orf82Q86X59 251 aaPredicted RBP14.14□□□□□ -0.15
HLA-F-229ENST00000489502 KRT222Q8N1A0 295 aa14.14□□□□□ -0.15
HLA-F-229ENST00000489502 SFRP1Q8N474 314 aa14.14□□□□□ -0.15
HLA-F-229ENST00000489502 GPR150Q8NGU9 434 aa14.14□□□□□ -0.15
HLA-F-229ENST00000489502 MAPK15Q8TD08 544 aa14.14□□□□□ -0.15
HLA-F-229ENST00000489502 NAT6Q93015 286 aa14.14□□□□□ -0.15
HLA-F-229ENST00000489502 CERS2Q96G23 380 aa14.14□□□□□ -0.15
HLA-F-229ENST00000489502 LINC00615Q96LM1 132 aaPredicted RBP14.14□□□□□ -0.15
HLA-F-229ENST00000489502 RMDN2Q96LZ7 410 aa14.14□□□□□ -0.15
HLA-F-229ENST00000489502 RHOXF2Q9BQY4 288 aa14.14□□□□□ -0.15
HLA-F-229ENST00000489502 FAM167BQ9BTA0 163 aa14.14□□□□□ -0.15
HLA-F-229ENST00000489502 COG4Q9H9E3 785 aa14.14□□□□□ -0.15
HLA-F-229ENST00000489502 VPS37BQ9H9H4 285 aa14.14□□□□□ -0.15
HLA-F-229ENST00000489502 ZDHHC18Q9NUE0 388 aa14.14□□□□□ -0.15
HLA-F-229ENST00000489502 COL27A1Q8IZC6 1860 aaPredicted RBP14.14□□□□□ -0.15
HLA-F-229ENST00000489502 EME2A4GXA9 379 aaPredicted RBP14.13□□□□□ -0.15
HLA-F-229ENST00000489502 DKK1O94907 266 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 TOP3BO95985 862 aaKnown RBP14.13□□□□□ -0.15
HLA-F-229ENST00000489502 FTH1P02794 183 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 OR56A5P0C7T3 313 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 PPARGP37231 505 aaPredicted RBP14.13□□□□□ -0.15
HLA-F-229ENST00000489502 ABCG1P45844 678 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 CSE1LP55060 971 aaKnown RBP14.13□□□□□ -0.15
HLA-F-229ENST00000489502 FOXC1Q12948 553 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 BRD3Q15059 726 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 ZNF658BQ4V348 819 aaPredicted RBP14.13□□□□□ -0.15
HLA-F-229ENST00000489502 TEX35Q5T0J7 233 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 RNF187Q5TA31 235 aaPredicted RBP14.13□□□□□ -0.15
HLA-F-229ENST00000489502 IYDQ6PHW0 289 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 SDCCAG8Q86SQ7 713 aaPredicted RBP14.13□□□□□ -0.15
HLA-F-229ENST00000489502 CFAP206Q8IYR0 622 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 Q8N9G6 341 aaPredicted RBP14.13□□□□□ -0.15
HLA-F-229ENST00000489502 SPDYE1Q8NFV5 336 aaPredicted RBP14.13□□□□□ -0.15
HLA-F-229ENST00000489502 IFT81Q8WYA0 676 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 ELMO1Q92556 727 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 FAM136AQ96C01 138 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 C9orf72Q96LT7 481 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 CCDC3Q9BQI4 270 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 CCM2Q9BSQ5 444 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 WWP1Q9H0M0 922 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 P2RY12Q9H244 342 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 PPANQ9NQ55 473 aaKnown RBP14.13□□□□□ -0.15
HLA-F-229ENST00000489502 FAM114A2Q9NRY5 505 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 GNPTGQ9UJJ9 305 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 CRYL1Q9Y2S2 319 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 PCDHGA1Q9Y5H4 931 aa14.13□□□□□ -0.15
HLA-F-229ENST00000489502 CFAP20Q9Y6A4 193 aaKnown RBP14.13□□□□□ -0.15
HLA-F-229ENST00000489502 DNMT3AQ9Y6K1 912 aaPredicted RBP14.13□□□□□ -0.15
HLA-F-229ENST00000489502 PRAMEF33A0A0G2JMD5 474 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 MED19A0JLT2 244 aaPredicted RBP14.12□□□□□ -0.15
HLA-F-229ENST00000489502 RHPN2P1A8MT19 583 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 QSOX1O00391 747 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 EIF3HO15372 352 aaKnown RBP eCLIP14.12□□□□□ -0.15
HLA-F-229ENST00000489502 NIPSNAP2O75323 286 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 SLC35G4P0C7Q5 338 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 SLC2A4P14672 509 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 GLB1P16278 677 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 RPS3P23396 243 aaKnown RBP eCLIP14.12□□□□□ -0.151e-9■□□□□ 10.3
HLA-F-229ENST00000489502 FMO4P31512 558 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 UBE2IP63279 158 aaKnown RBP14.12□□□□□ -0.15
HLA-F-229ENST00000489502 HHEXQ03014 270 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 CLCA4Q14CN2 919 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 SYTL3Q4VX76 610 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 GLE1Q53GS7 698 aaKnown RBP14.12□□□□□ -0.15
HLA-F-229ENST00000489502 AGAP9Q5VTM2 703 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 METRNLQ641Q3 311 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 PTRHD1Q6GMV3 140 aaKnown RBP14.12□□□□□ -0.15
HLA-F-229ENST00000489502 SPRED1Q7Z699 444 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 CCNJLQ8IV13 435 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 SPNS2Q8IVW8 549 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 TRIM48Q8IWZ4 208 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 CALML6Q8TD86 181 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 PYROXD1Q8WU10 500 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 IMP3Q9NV31 184 aaKnown RBP14.12□□□□□ -0.15
HLA-F-229ENST00000489502 ZNF624Q9P2J8 865 aaPredicted RBP14.12□□□□□ -0.15
HLA-F-229ENST00000489502 LRIT1Q9P2V4 623 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 FBXO5Q9UKT4 447 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 PTPRBP23467 1997 aa14.12□□□□□ -0.15
HLA-F-229ENST00000489502 KIR2DS5A0A0G2JLQ3 304 aa14.11□□□□□ -0.15
HLA-F-229ENST00000489502 A0A0G2JNG1 304 aa14.11□□□□□ -0.15
HLA-F-229ENST00000489502 KIR2DS3K7RE56 304 aa14.11□□□□□ -0.15
HLA-F-229ENST00000489502 PPM1DO15297 605 aa14.11□□□□□ -0.15
HLA-F-229ENST00000489502 NUDT21O43809 227 aaKnown RBP14.11□□□□□ -0.15
HLA-F-229ENST00000489502 HYAL3O43820 417 aaPredicted RBP14.11□□□□□ -0.15
HLA-F-229ENST00000489502 OPA1O60313 960 aa14.11□□□□□ -0.15
HLA-F-229ENST00000489502 KCNJ13O60928 360 aa14.11□□□□□ -0.15
HLA-F-229ENST00000489502 PIAS1O75925 651 aa14.11□□□□□ -0.15
HLA-F-229ENST00000489502 TRIM16O95361 564 aa14.11□□□□□ -0.15
HLA-F-229ENST00000489502 S1PR4O95977 384 aa14.11□□□□□ -0.15
HLA-F-229ENST00000489502 GP1BAP07359 652 aa14.11□□□□□ -0.15
HLA-F-229ENST00000489502 SPINK2P20155 84 aa14.11□□□□□ -0.15
HLA-F-229ENST00000489502 PDHA2P29803 388 aa14.11□□□□□ -0.15
HLA-F-229ENST00000489502 ECHS1P30084 290 aa14.11□□□□□ -0.15
HLA-F-229ENST00000489502 SSTR1P30872 391 aa14.11□□□□□ -0.15
HLA-F-229ENST00000489502 SLC19A1P41440 591 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms