RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, human

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-208	ENST00000488571	VCL	P18206	1134 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	LPO	P22079	712 aa	Predicted RBP	11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	HMGCL	P35914	325 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	PBX1	P40424	430 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	HAL	P42357	657 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	CTSC	P53634	463 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	RPS15	P62841	145 aa	Known RBP	11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	HSD11B2	P80365	405 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	GUCA2A	Q02747	115 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	AP1B1	Q10567	949 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	INPP5J	Q15735	1006 aa	Predicted RBP	11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	GPR19	Q15760	415 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	SLC9A4	Q6AI14	798 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	LCN10	Q6JVE6	187 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	B4GALNT4	Q76KP1	1039 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	AMZ2	Q86W34	360 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	KMT5C	Q86Y97	462 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	TTC30B	Q8N4P2	665 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	RASGEF1A	Q8N9B8	481 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571		Q8NA96	180 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	ZNF501	Q96CX3	271 aa	Predicted RBP	11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	AGAP3	Q96P47	875 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	IL26	Q9NPH9	171 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	ACSS2	Q9NR19	701 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	TMEM63C	Q9P1W3	806 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	CTTNBP2NL	Q9P2B4	639 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	FARSA	Q9Y285	508 aa	Known RBP	11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	HEY1	Q9Y5J3	304 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571		A1L4Q6	167 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	OR5K3	A6NET4	321 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	SMTNL1	A8MU46	457 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	ZNF487	B1APH4	448 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	TCP11X1	B4DZS4	312 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	GAPDHS	O14556	408 aa	Predicted RBP	11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	UGT1A9	O60656	530 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	KCNJ13	O60928	360 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	SCRG1	O75711	98 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	POP7	O75817	140 aa	Known RBP	11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	UGT1A6	P19224	532 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	UGT1A1	P22309	533 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	UGT1A4	P22310	534 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	TUBB4B	P68371	445 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	MRPL49	Q13405	166 aa	Known RBP	11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	TUBB2A	Q13885	445 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	GTF2H3	Q13889	308 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	NFE2L1	Q14494	772 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	IQCB1	Q15051	598 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	NOMO1	Q15155	1222 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	NFKBIB	Q15653	356 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	CHRNA6	Q15825	494 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	PRAMEF17	Q5VTA0	474 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	FAM69B	Q5VUD6	431 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	IZUMO3	Q5VZ72	239 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	JMJD6	Q6NYC1	403 aa	Predicted RBP	11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	KLHL35	Q6PF15	583 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	NPNT	Q6UXI9	565 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	TMEM126B	Q8IUX1	230 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	GDAP1	Q8TB36	358 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	DTX3L	Q8TDB6	740 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	MR1	Q95460	341 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	PPM1M	Q96MI6	270 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	CD180	Q99467	661 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	TUBB2B	Q9BVA1	445 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	PACSIN1	Q9BY11	444 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	XPO4	Q9C0E2	1151 aa	Known RBP	11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	CHST8	Q9H2A9	424 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	UGT1A7	Q9HAW7	530 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	UGT1A10	Q9HAW8	530 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	UGT1A8	Q9HAW9	530 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	GLOD4	Q9HC38	313 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	CBX8	Q9HC52	389 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	LUZP4	Q9P127	313 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	UVRAG	Q9P2Y5	699 aa		11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	CFAP20	Q9Y6A4	193 aa	Known RBP	11.08	□□□□□ -0.64
SNU13-208	ENST00000488571	PRRC2C	Q9Y520	2896 aa	Known RBP	11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	UBA6	A0AVT1	1052 aa	Predicted RBP	11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	LRRD1	A4D1F6	860 aa		11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	OR2AG2	A6NM03	316 aa		11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	PMPCB	O75439	489 aa		11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	CAPN1	P07384	714 aa		11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	MTHFD1	P11586	935 aa	Known RBP	11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	CD68	P34810	354 aa	Predicted RBP	11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	ARL4D	P49703	201 aa		11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	ZBED6	P86452	979 aa		11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	PDE1B	Q01064	536 aa		11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	PLCL1	Q15111	1095 aa		11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	PDK1	Q15118	436 aa		11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	TEX44	Q53QW1	395 aa		11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	PLEKHS1	Q5SXH7	462 aa		11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	METRNL	Q641Q3	311 aa		11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	DUS1L	Q6P1R4	473 aa	Known RBP	11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	FBXO38	Q6PIJ6	1188 aa		11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	TMEM220	Q6QAJ8	160 aa		11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	ENDOV	Q8N8Q3	282 aa	Known RBP	11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	DDHD1	Q8NEL9	900 aa		11.07	□□□□□ -0.64
SNU13-208	ENST00000488571	FDCSP	Q8NFU4	85 aa		11.07	□□□□□ -0.64

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