RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 SPATA9Q9BWV2 254 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 WDR11Q9BZH6 1224 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 MMP27Q9H306 513 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 AGPAT4Q9NRZ5 378 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 SETD4Q9NVD3 440 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 ANAPC2Q9UJX6 822 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 ASB4Q9Y574 426 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 NRAPQ86VF7 1730 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 DENND4AQ7Z401 1863 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 E7ESA3 106 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 ARSBP15848 533 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 CAPN3P20807 821 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 GMPRP36959 345 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 NSFP46459 744 aaKnown RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 YAP1P46937 504 aaKnown RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 PRELPP51888 382 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 KLF10Q13118 480 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 IRF3Q14653 427 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 BCL7AQ4VC05 210 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 IZUMO3Q5VZ72 239 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 ZBTB49Q6ZSB9 765 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 TMC8Q8IU68 726 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 RDH10Q8IZV5 341 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 SFRP1Q8N474 314 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 ATG16L2Q8NAA4 619 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.28□□□□□ -1.4
SIK3-212ENST00000488337 ZBTB18Q99592 522 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 ZNF577Q9BSK1 485 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 TEKT3Q9BXF9 490 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 ALX4Q9H161 411 aaPredicted RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 BCAS3Q9H6U6 928 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 NOL11Q9H8H0 719 aaKnown RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 SAYSD1Q9NPB0 183 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 NDUFAF1Q9Y375 327 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 H0YAE9 185 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 EEF2KO00418 725 aaKnown RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 MEIS2O14770 477 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 PAPSS1O43252 624 aaPredicted RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 LYPLA1O75608 230 aaPredicted RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 SGPL1O95470 568 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 SEC24AO95486 1093 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 RB1P06400 928 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 MUC1P15941 1255 aaPredicted RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 ITGB8P26012 769 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 ARRB2P32121 409 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 SREBF1P36956 1147 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 ACTR1AP61163 376 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 KCNJ10P78508 379 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 KCNAB2Q13303 367 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 TMEM44Q2T9K0 475 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 KIF19Q2TAC6 998 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 BTBD16Q32M84 506 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 TEDDM1Q5T9Z0 273 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 PDPK2PQ6A1A2 396 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 NRARPQ7Z6K4 114 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 MIB1Q86YT6 1006 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 PCSK9Q8NBP7 692 aaKnown RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 PIWIL2Q8TC59 973 aaKnown RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 DEPDC1BQ8WUY9 529 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 DCAF4Q8WV16 495 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 LRRC39Q96DD0 335 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 ACCSQ96QU6 501 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 ADAM33Q9BZ11 813 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 GPR63Q9BZJ6 419 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 DUSP15Q9H1R2 295 aaPredicted RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 CRTAC1Q9NQ79 661 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 GDE1Q9NZC3 331 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 PACSIN3Q9UKS6 424 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 CHTOPQ9Y3Y2 248 aaKnown RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 FAM92AA1XBS5 289 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 TCAF2A6NFQ2 919 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 EIF3GO75821 320 aaKnown RBP eCLIP6.28□□□□□ -1.4
SIK3-212ENST00000488337 ZMPSTE24O75844 475 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 CCNB2O95067 398 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 CLIC3O95833 236 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 IFNA4P05014 189 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 BMP3P12645 472 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 FGFR3P22607 806 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 CDH4P55283 916 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 PSPHP78330 225 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 FSTL1Q12841 308 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 SMAD4Q13485 552 aaKnown RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 GPR68Q15743 365 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 HFEQ30201 348 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 RBM48Q5RL73 367 aaKnown RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 MROH9Q5TGP6 573 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 LIN9Q5TKA1 542 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 C8orf82Q6P1X6 216 aaPredicted RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 PADI6Q6TGC4 694 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 RHPN2Q8IUC4 686 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 EIF4E3Q8N5X7 224 aaKnown RBP6.28□□□□□ -1.4
SIK3-212ENST00000488337 UPF1Q92900 1129 aaKnown RBP eCLIP6.28□□□□□ -1.45e-8■□□□□ 9.6
SIK3-212ENST00000488337 STRA6Q9BX79 667 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 MIR1-1HGQ9H1L0 117 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 SEMA6CQ9H3T2 930 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 DBNDD1Q9H9R9 158 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 EQTNQ9NQ60 294 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 ZNF224Q9NZL3 707 aa6.28□□□□□ -1.4
SIK3-212ENST00000488337 PNMA8BQ9ULN7 279 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms