RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 SMAD1Q15797 465 aaKnown RBP13.55□□□□□ -0.24
COPS7B-221ENST00000488111 MAP7D1Q3KQU3 841 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 ALG1LQ6GMV1 187 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 TTC33Q6PID6 262 aaPredicted RBP13.55□□□□□ -0.24
COPS7B-221ENST00000488111 RANBP10Q6VN20 620 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 CHSY3Q70JA7 882 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 ZNF786Q8N393 782 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 RYBPQ8N488 228 aaPredicted RBP13.55□□□□□ -0.24
COPS7B-221ENST00000488111 SREK1Q8WXA9 508 aaKnown RBP13.55□□□□□ -0.24
COPS7B-221ENST00000488111 TADA1Q96BN2 335 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 CHFRQ96EP1 664 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 NPAS2Q99743 824 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 BRD9Q9H8M2 597 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 TMEM9Q9P0T7 183 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 CNOT6Q9ULM6 557 aaKnown RBP13.55□□□□□ -0.24
COPS7B-221ENST00000488111 PCDHGA7Q9Y5G6 932 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 SNX13Q9Y5W8 968 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.54□□□□□ -0.24
COPS7B-221ENST00000488111 BMP2P12643 396 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 OPRD1P41143 372 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 RPL14P50914 215 aaKnown RBP13.54□□□□□ -0.24
COPS7B-221ENST00000488111 SMAD4Q13485 552 aaKnown RBP13.54□□□□□ -0.24
COPS7B-221ENST00000488111 GALNT3Q14435 633 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 POU6F1Q14863 301 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 RAB39AQ14964 217 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 NR1D2Q14995 579 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 DLG2Q15700 870 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 DEPDC1Q5TB30 811 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 GPR107Q5VW38 600 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 ZBTB49Q6ZSB9 765 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 PTAR1Q7Z6K3 402 aaPredicted RBP13.54□□□□□ -0.24
COPS7B-221ENST00000488111 LINC00523Q86TU6 105 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 PACRGLQ8N7B6 248 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 ZNF366Q8N895 744 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 AGR3Q8TD06 166 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 HLA-CQ95604 372 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 OLFM1Q99784 485 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 MTG2Q9H4K7 406 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 ZDHHC4Q9NPG8 344 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 C20orf96Q9NUD7 363 aaPredicted RBP13.54□□□□□ -0.24
COPS7B-221ENST00000488111 BFARQ9NZS9 450 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 ERVW-1Q9UQF0 538 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 HS3ST2Q9Y278 367 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 ANHXE9PGG2 379 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 SOCS2O14508 198 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 OXSR1O95747 527 aaPredicted RBP13.54□□□□□ -0.24
COPS7B-221ENST00000488111 CHRNGP07510 517 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 PGAM1P18669 254 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 GP5P40197 560 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 PRAMEP78395 509 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 GRSF1Q12849 480 aaKnown RBP eCLIP13.54□□□□□ -0.24
COPS7B-221ENST00000488111 DMC1Q14565 340 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 TMEM198Q66K66 360 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 NCEH1Q6PIU2 408 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 TMEM26Q6ZUK4 368 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 CMC1Q7Z7K0 106 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 CLEC14AQ86T13 490 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 CNDP2Q96KP4 475 aaKnown RBP13.54□□□□□ -0.24
COPS7B-221ENST00000488111 PPP1R2P1Q96PQ5 205 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 SMIM14Q96QK8 99 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 UNKQ9C0B0 810 aaKnown RBP13.54□□□□□ -0.24
COPS7B-221ENST00000488111 PCDHAC1Q9H158 963 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 NOL11Q9H8H0 719 aaKnown RBP13.54□□□□□ -0.24
COPS7B-221ENST00000488111 ADA2Q9NZK5 511 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 CDYLQ9Y232 598 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 TSC22D4Q9Y3Q8 395 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 CORINQ9Y5Q5 1042 aa13.54□□□□□ -0.24
COPS7B-221ENST00000488111 TTC34A8MYJ7 566 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 CFAP99D6REC4 459 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 J3QRK9 145 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 ARNTLO00327 626 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 DLGAP1O14490 977 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 PRKCQQ04759 706 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 ITPRIPL2Q3MIP1 535 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 SIRPB2Q5JXA9 342 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 GRTP1Q5TC63 336 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 Q6ZVU0 165 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 DCLK2Q8N568 766 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 SLC15A4Q8N697 577 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 PCYOX1LQ8NBM8 494 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 STARD8Q92502 1023 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 LPGAT1Q92604 370 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 FBXL8Q96CD0 374 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 MRGPRX3Q96LB0 322 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 CGREF1Q99674 301 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 DRC3Q9H069 523 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 FBRSL1Q9HCM7 1045 aaKnown RBP13.53□□□□□ -0.24
COPS7B-221ENST00000488111 CHRAC1Q9NRG0 131 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 ATAD3AQ9NVI7 634 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 RIC8BQ9NVN3 520 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 SMOXQ9NWM0 555 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 ELOVL2Q9NXB9 296 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 SCHIP1Q9P0W5 487 aaPredicted RBP13.53□□□□□ -0.24
COPS7B-221ENST00000488111 VTI1BQ9UEU0 232 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 SARDHQ9UL12 918 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 SLC27A6Q9Y2P4 619 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 RAI2Q9Y5P3 530 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 COPG1Q9Y678 874 aaKnown RBP13.53□□□□□ -0.24
COPS7B-221ENST00000488111 DENND4AQ7Z401 1863 aa13.53□□□□□ -0.24
COPS7B-221ENST00000488111 LOC285095A0A1B0GVY8 99 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms