RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 CD68P34810 354 aaPredicted RBP8.36□□□□□ -1.07
PRKCB-208ENST00000487674 CDKN2BP42772 138 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 WNT3AP56704 352 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 PPP1CAP62136 330 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 WASHC5Q12768 1159 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 ITGA9Q13797 1035 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 UBAP2LQ14157 1087 aaKnown RBP8.36□□□□□ -1.07
PRKCB-208ENST00000487674 TFDP2Q14188 446 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 ERV3-1Q14264 604 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 PLCL1Q15111 1095 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 NOMO1Q15155 1222 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 IGFBP7Q16270 282 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 PPP2R5EQ16537 467 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 TAZQ16635 292 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 SIRPB2Q5JXA9 342 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 LDLRAP1Q5SW96 308 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 FAM182AQ5T1J6 154 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 KDELC1Q6UW63 502 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 FAM151BQ6UXP7 276 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 B4GALNT4Q76KP1 1039 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 GLT6D1Q7Z4J2 308 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 RETREG3Q86VR2 466 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 KMT5CQ86Y97 462 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 TTC30BQ8N4P2 665 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 RASGEF1AQ8N9B8 481 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 GPR150Q8NGU9 434 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 CT55Q8WUE5 264 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 SEC14L1Q92503 715 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 RNF31Q96EP0 1072 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 FCRL4Q96PJ5 515 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 CD180Q99467 661 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 VAT1Q99536 393 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 TWSG1Q9GZX9 223 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 LHX9Q9NQ69 397 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 ABHD10Q9NUJ1 306 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 SMOXQ9NWM0 555 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 UBP1Q9NZI7 540 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 KLHL8Q9P2G9 620 aaPredicted RBP8.36□□□□□ -1.07
PRKCB-208ENST00000487674 TRIM10Q9UDY6 481 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 RARRES3Q9UL19 164 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 PADI1Q9ULC6 663 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 USP9YO00507 2555 aaPredicted RBP8.35□□□□□ -1.07
PRKCB-208ENST00000487674 USP9XQ93008 2570 aaPredicted RBP8.35□□□□□ -1.07
PRKCB-208ENST00000487674 IGHV5-51A0A0C4DH38 117 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 CDC14CA4D256 554 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 OR5K3A6NET4 321 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 TLCD2A6NGC4 264 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 GPR39O43194 453 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 SIAH2O43255 324 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 CBFA2T2O43439 604 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 PSTPIP1O43586 416 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 SPOPO43791 374 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 MFAP3LO75121 409 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 TIAF1O95411 115 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 TPM1P09493 284 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 FURINP09958 794 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 MTHFD1P11586 935 aaKnown RBP8.35□□□□□ -1.07
PRKCB-208ENST00000487674 PECAM1P16284 738 aaPredicted RBP8.35□□□□□ -1.07
PRKCB-208ENST00000487674 HLA-DPA1P20036 260 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 CHRNA4P43681 627 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 CD97P48960 835 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 CTSCP53634 463 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 ACY1Q03154 408 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 MPP3Q13368 585 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 KCNAB1Q14722 419 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 TCEAL1Q15170 157 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 SLC1A5Q15758 541 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 CHRNA6Q15825 494 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 RPE65Q16518 533 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 LONRF2Q1L5Z9 754 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 DNTTIP2Q5QJE6 756 aaKnown RBP8.35□□□□□ -1.07
PRKCB-208ENST00000487674 GPRC6AQ5T6X5 926 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 PWWP2BQ6NUJ5 590 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 MFSD7Q6UXD7 560 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 FAM83HQ6ZRV2 1179 aaPredicted RBP8.35□□□□□ -1.07
PRKCB-208ENST00000487674 ASB18Q6ZVZ8 466 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 TMEM135Q86UB9 458 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 BPHLQ86WA6 291 aaPredicted RBP8.35□□□□□ -1.07
PRKCB-208ENST00000487674 ATCAYQ86WG3 371 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 APLFQ8IW19 511 aaPredicted RBP8.35□□□□□ -1.07
PRKCB-208ENST00000487674 SIDT2Q8NBJ9 832 aaKnown RBP8.35□□□□□ -1.07
PRKCB-208ENST00000487674 IPMKQ8NFU5 416 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 BLOC1S5Q8TDH9 187 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 MIB2Q96AX9 1013 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 OXNAD1Q96HP4 312 aaPredicted RBP8.35□□□□□ -1.07
PRKCB-208ENST00000487674 ZNF514Q96K75 400 aaPredicted RBP8.35□□□□□ -1.07
PRKCB-208ENST00000487674 CCDC42Q96M95 316 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 FCRL5Q96RD9 977 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 ACTL8Q9H568 366 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 SPTLC3Q9NUV7 552 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 IMP3Q9NV31 184 aaKnown RBP8.35□□□□□ -1.07
PRKCB-208ENST00000487674 IL17CQ9P0M4 197 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 SAE1Q9UBE0 346 aaPredicted RBP8.35□□□□□ -1.07
PRKCB-208ENST00000487674 INTUQ9ULD6 942 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 PLAAQ9Y263 795 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 MAN2B2Q9Y2E5 1009 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 PKP3Q9Y446 797 aa8.35□□□□□ -1.07
PRKCB-208ENST00000487674 DNMT3AQ9Y6K1 912 aaPredicted RBP8.35□□□□□ -1.07
PRKCB-208ENST00000487674 SPTBN1Q01082 2364 aaKnown RBP8.34□□□□□ -1.07
PRKCB-208ENST00000487674 PIPSLA2A3N6 862 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms