RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 CKMT2P17540 419 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 EN2P19622 333 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 ARL1P40616 181 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 HTR6P50406 440 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 LIPEQ05469 1076 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 CDKN3Q16667 212 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 TIGD2Q4W5G0 525 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 IL27RAQ6UWB1 636 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 ITIH5Q86UX2 942 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 ADGRG5Q8IZF4 528 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 MYO1HQ8N1T3 1032 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 PACRGLQ8N7B6 248 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 OR4F6Q8NGB9 312 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 LKAAEAR1Q8TD35 194 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 DDI1Q8WTU0 396 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 KCTD14Q9BQ13 255 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 IL26Q9NPH9 171 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 AGPAT4Q9NRZ5 378 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 LSM7Q9UK45 103 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 PTBP2Q9UKA9 531 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 OARD1Q9Y530 152 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 SOCS2O14508 198 aa17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 SOCS5O75159 536 aa17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 OR6B1O95007 311 aa17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 OTCP00480 354 aa17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 GPIP06744 558 aa17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 ITGB6P18564 788 aa17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 EMX2Q04743 252 aa17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 PRKG2Q13237 762 aa17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 INTS11Q5TA45 600 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 LYPLAL1Q5VWZ2 237 aa17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 CNKSR3Q6P9H4 555 aa17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 ANKRD33Q7Z3H0 272 aa17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 KIAA2013Q8IYS2 634 aa17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 METTL25Q8N6Q8 603 aa17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 FAM126AQ9BYI3 521 aaPredicted RBP17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 MRPL17Q9NRX2 175 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 PRSS21Q9Y6M0 314 aa17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 OBSL1O75147 1896 aa17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 ZNF106Q9H2Y7 1883 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-207ENST00000486828 MYOCOSA0A1B0GUC4 107 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 SLC25A14O95258 325 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 CLDN7O95471 211 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 BMP1P13497 986 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 DGKAP23743 735 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 ACRV1P26436 265 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 HNF1BP35680 557 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 TRAF3Q13114 568 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 AUTS2Q8WXX7 1259 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 DGCR14Q96DF8 476 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 TMEM79Q9BSE2 394 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 C11orf49Q9H6J7 331 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 IPPKQ9H8X2 491 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 DUS2Q9NX74 493 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 SLAMF8Q9P0V8 285 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 SCN8AQ9UQD0 1980 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 KIAA1671Q9BY89 1806 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 GLYATL1P3A0A0U1RQE8 302 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 TCRBV5S2A0A599 114 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 LSM1O15116 133 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 TAPBPO15533 448 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 ATP6V1B1P15313 513 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 BPIP17213 487 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 FASP25445 335 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 OXTRP30559 389 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 GKP32189 559 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 CASP2P42575 452 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 FUT11Q495W5 492 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 NADK2Q4G0N4 442 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 NHSL2Q5HYW2 709 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 C1orf53Q5VUE5 145 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 NANOGP8Q6NSW7 305 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 IFNEQ86WN2 208 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 CPXM2Q8N436 756 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 DPP10Q8N608 796 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 PAF1Q8N7H5 531 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 TTC16Q8NEE8 873 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 TRPV3Q8NET8 790 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 ZNF689Q96CS4 500 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 C17orf80Q9BSJ5 609 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 ANKRD60Q9BZ19 345 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 NSUN3Q9H649 340 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 ATP13A3Q9H7F0 1226 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 NANOGQ9H9S0 305 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 INTS7Q9NVH2 962 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 ELOVL2Q9NXB9 296 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 MAFFQ9ULX9 164 aa17.7■□□□□ 0.42
PDLIM7-207ENST00000486828 SAC3D1A6NKF1 404 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 TRIM16O95361 564 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 ENO2P09104 434 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 CNPP09543 421 aaKnown RBP17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 MTHFD1P11586 935 aaKnown RBP17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 HSPA7P48741 367 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 LMAN2Q12907 356 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 NR6A1Q15406 480 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 ADRM1Q16186 407 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 CYP51A1Q16850 503 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 AASDHQ4L235 1098 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 PRR23BQ6ZRT6 265 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 NECAB2Q7Z6G3 386 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms