RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TCEAL2Q9H3H9 227 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-229ENST00000486665 CYP4F12Q9HCS2 524 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 ZNF446Q9NWS9 450 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 TXNDC16Q9P2K2 825 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 SLC23A2Q9UGH3 650 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 ZNHIT2Q9UHR6 403 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 MOSPD1Q9UJG1 213 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 ANKRD6Q9Y2G4 727 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 VWA7Q9Y334 891 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 PCDHB1Q9Y5F3 818 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 FAM95CA0A1B0GW59 222 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 PRSS38A1L453 326 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 SRRM3A6NNA2 597 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-229ENST00000486665 FOXO6A8MYZ6 492 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 RASGRF2O14827 1237 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 POP7O75817 140 aaKnown RBP12.57□□□□□ -0.4
HDAC6-229ENST00000486665 TRIM16O95361 564 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 CFIP05156 583 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 ITGA2BP08514 1039 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 OR56A5P0C7T3 313 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 SAT1P21673 171 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 CTSKP43235 329 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 LIMK2P53671 638 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 C21orf59P57076 290 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 TAS2R39P59534 338 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 TEAD4Q15561 434 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 BCL7AQ4VC05 210 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 PYCR3Q53H96 274 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 MROH9Q5TGP6 573 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 XKR5Q6UX68 686 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 LRIG3Q6UXM1 1119 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 NAPRTQ6XQN6 538 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 C11orf96Q7Z7L8 435 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 TDRPQ86YL5 185 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 TRAPPC5Q8IUR0 188 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 HID1Q8IV36 788 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 ELMO2Q96JJ3 720 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 GPR22Q99680 433 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 SLC30A3Q99726 388 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 CCM2Q9BSQ5 444 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 NUSAP1Q9BXS6 441 aaKnown RBP12.57□□□□□ -0.4
HDAC6-229ENST00000486665 ROPN1BQ9BZX4 212 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-229ENST00000486665 ZCCHC2Q9C0B9 1178 aaKnown RBP12.57□□□□□ -0.4
HDAC6-229ENST00000486665 RMI1Q9H9A7 625 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 CAB39LQ9H9S4 337 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 CARS2Q9HA77 564 aaKnown RBP12.57□□□□□ -0.4
HDAC6-229ENST00000486665 ROPN1Q9HAT0 212 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-229ENST00000486665 CAPN10Q9HC96 672 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 EURLQ9NYK6 297 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 KLQ9UEF7 1012 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 SUSD2Q9UGT4 822 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 TBK1Q9UHD2 729 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 GNPTGQ9UJJ9 305 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 ZNF180Q9UJW8 692 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 GPR34Q9UPC5 381 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 GPSM3Q9Y4H4 160 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 SNX11Q9Y5W9 270 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 ST14Q9Y5Y6 855 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 IKBKGQ9Y6K9 419 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 ANKRD11Q6UB99 2663 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-229ENST00000486665 CELSR3Q9NYQ7 3312 aa12.57□□□□□ -0.4
HDAC6-229ENST00000486665 GPR89AB7ZAQ6 455 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 AGPSO00116 658 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 KMOO15229 486 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 MAGEC1O60732 1142 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 SASH3O75995 380 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 TNFP01375 233 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 GPR89BP0CG08 455 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 CHRM3P20309 590 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 PBLDP30039 288 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-229ENST00000486665 CCR7P32248 378 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 PRLHRP49683 370 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 SERPINB9P50453 376 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 PPARDQ03181 441 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 TCEA2Q15560 299 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 DUOXA1Q1HG43 343 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 PLA2G4EQ3MJ16 856 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 ZNF658BQ4V348 819 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-229ENST00000486665 CEP85LQ5SZL2 805 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 PIM3Q86V86 326 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 LRRTM4Q86VH4 590 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 GALNT13Q8IUC8 556 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 CEP97Q8IW35 865 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 MZB1Q8WU39 189 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 SKA1Q96BD8 255 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 ZNF514Q96K75 400 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-229ENST00000486665 LINC00615Q96LM1 132 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-229ENST00000486665 GTPBP2Q9BX10 602 aaKnown RBP12.56□□□□□ -0.4
HDAC6-229ENST00000486665 TMEM168Q9H0V1 697 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 CCDC68Q9H2F9 335 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 PSMC3IPQ9P2W1 217 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-229ENST00000486665 GULP1Q9UBP9 304 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 SLC39A10Q9ULF5 831 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 CORO1CQ9ULV4 474 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-229ENST00000486665 COMMD10Q9Y6G5 202 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 DGKBQ9Y6T7 804 aa12.56□□□□□ -0.4
HDAC6-229ENST00000486665 SMG1Q96Q15 3661 aaKnown RBP12.55□□□□□ -0.4
HDAC6-229ENST00000486665 TRIM49D1C9J1S8 452 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 H3BMM5 538 aa12.55□□□□□ -0.4
HDAC6-229ENST00000486665 TAF4O00268 1085 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms