RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 SLC10A2Q12908 348 aaPredicted RBP9.67□□□□□ -0.86
SND1-213ENST00000486037 ELOAQ14241 798 aaKnown RBP9.67□□□□□ -0.86
SND1-213ENST00000486037 PAFAH1B3Q15102 231 aaKnown RBP9.67□□□□□ -0.86
SND1-213ENST00000486037 CYTH1Q15438 398 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 TRADDQ15628 312 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 CCDC70Q6NSX1 233 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 ERAP2Q6P179 960 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 DOK6Q6PKX4 331 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 B4GALNT4Q76KP1 1039 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 MAATS1Q7Z4T9 603 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 RASGRP3Q8IV61 690 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 IQCKQ8N0W5 287 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 ADAMTS17Q8TE56 1095 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 CASKIN2Q8WXE0 1202 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 THAP4Q8WY91 577 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 SLCO2A1Q92959 643 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 NSMCE3Q96MG7 304 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 RUNDC3BQ96NL0 473 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 TEX101Q9BY14 249 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 FRMD8P1Q9BZ68 369 aaPredicted RBP9.67□□□□□ -0.86
SND1-213ENST00000486037 NOL6Q9H6R4 1146 aaKnown RBP9.67□□□□□ -0.86
SND1-213ENST00000486037 C10orf88Q9H8K7 445 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 OGFRQ9NZT2 677 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 PPARGC1AQ9UBK2 798 aaKnown RBP9.67□□□□□ -0.86
SND1-213ENST00000486037 RAB21Q9UL25 225 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 PADI1Q9ULC6 663 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 DRG1Q9Y295 367 aaKnown RBP9.67□□□□□ -0.86
SND1-213ENST00000486037 NEU2Q9Y3R4 380 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 HEY1Q9Y5J3 304 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 MN1Q10571 1320 aaPredicted RBP9.66□□□□□ -0.86
SND1-213ENST00000486037 ESYT3A0FGR9 886 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 DYNC1I1O14576 645 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 ANKRD34CP0C6C1 535 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 ELFN1P0C7U0 828 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 ETS1P14921 441 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 ZFXP17010 805 aaPredicted RBP9.66□□□□□ -0.86
SND1-213ENST00000486037 PTPN4P29074 926 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 RGRP47804 291 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 ZNF135P52742 658 aaPredicted RBP9.66□□□□□ -0.86
SND1-213ENST00000486037 CDK3Q00526 305 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 GUCY2DQ02846 1103 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 HHEXQ03014 270 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 RAD51Q06609 339 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 PTK6Q13882 451 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 WDR93Q6P2C0 686 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 PRUNE1Q86TP1 453 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 GLIS1Q8NBF1 620 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 LRRN4Q8WUT4 740 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 NANOS1Q8WY41 292 aaKnown RBP9.66□□□□□ -0.86
SND1-213ENST00000486037 ANKRD7Q92527 254 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 P3H4Q92791 437 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 TBC1D31Q96DN5 1066 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 C9orf72Q96LT7 481 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 COQ10AQ96MF6 247 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 OLFM3Q96PB7 478 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 SMAD5Q99717 465 aaKnown RBP9.66□□□□□ -0.86
SND1-213ENST00000486037 DTLQ9NZJ0 730 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 ZNF148Q9UQR1 794 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 SLC17A4Q9Y2C5 497 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 TMEM98Q9Y2Y6 226 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 PCDHGB7Q9Y5F8 929 aa9.66□□□□□ -0.86
SND1-213ENST00000486037 C21orf140B9A014 251 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 DAPK3O43293 454 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 KIF1CO43896 1103 aaKnown RBP9.65□□□□□ -0.86
SND1-213ENST00000486037 PRICKLE3O43900 615 aaPredicted RBP9.65□□□□□ -0.86
SND1-213ENST00000486037 IVLP07476 585 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 CCNYL3P0C7X3 344 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 MYBL2P10244 700 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 RBP3P10745 1247 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 FGF5P12034 268 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 H2AFXP16104 143 aaPredicted RBP9.65□□□□□ -0.86
SND1-213ENST00000486037 EPHB2P29323 1055 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 HTR7P34969 479 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 PTGER4P35408 488 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 CARSP49589 748 aaKnown RBP9.65□□□□□ -0.86
SND1-213ENST00000486037 GDF10P55107 478 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 GEMIN4P57678 1058 aaKnown RBP9.65□□□□□ -0.86
SND1-213ENST00000486037 ACOX1Q15067 660 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 FAM182AQ5T1J6 154 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 AFMIDQ63HM1 303 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 DUPD1Q68J44 220 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 RWDD4Q6NW29 188 aaKnown RBP9.65□□□□□ -0.86
SND1-213ENST00000486037 TMCO3Q6UWJ1 677 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 DPPA4Q7L190 304 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 TRIM74Q86UV6 250 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 FJX1Q86VR8 437 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 GSPT2Q8IYD1 628 aaKnown RBP9.65□□□□□ -0.86
SND1-213ENST00000486037 NPWQ8N729 165 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 ST6GALNAC3Q8NDV1 305 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 HCAR2Q8TDS4 363 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 GRK7Q8WTQ7 553 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 SEC14L1Q92503 715 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 NUS1Q96E22 293 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 QKIQ96PU8 341 aaKnown RBP eCLIP9.65□□□□□ -0.864e-7■■■■□ 23.7
SND1-213ENST00000486037 ERP44Q9BS26 406 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 TRIM31Q9BZY9 425 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 MAGEH1Q9H213 219 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 DPH5Q9H2P9 285 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 PHPT1Q9NRX4 125 aaPredicted RBP9.65□□□□□ -0.86
SND1-213ENST00000486037 TMEM248Q9NWD8 314 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms