RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 PILRBQ9UKJ0 227 aa5.56□□□□□ -1.52
COPS3-208ENST00000486032 TMPRSS11EQ9UL52 423 aa5.56□□□□□ -1.52
COPS3-208ENST00000486032 CNOT6Q9ULM6 557 aaKnown RBP5.56□□□□□ -1.52
COPS3-208ENST00000486032 ANKRD6Q9Y2G4 727 aa5.56□□□□□ -1.52
COPS3-208ENST00000486032 DNAJC16Q9Y2G8 782 aa5.56□□□□□ -1.52
COPS3-208ENST00000486032 CRYL1Q9Y2S2 319 aa5.56□□□□□ -1.52
COPS3-208ENST00000486032 SNX11Q9Y5W9 270 aa5.56□□□□□ -1.52
COPS3-208ENST00000486032 SPAG17Q6Q759 2223 aa5.56□□□□□ -1.52
COPS3-208ENST00000486032 GVINP1Q7Z2Y8 2422 aa5.56□□□□□ -1.52
COPS3-208ENST00000486032 ADAMTS9Q9P2N4 1935 aa5.56□□□□□ -1.52
COPS3-208ENST00000486032 TDRD6O60522 2096 aaKnown RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 ZNF292O60281 2723 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 TRBV23OR9-2A0A075B6M9 112 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 PRSS38A1L453 326 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 SMIM23A6NLE4 172 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 IQCF5A8MTL0 148 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 CXorf49A8MYA2 514 aaPredicted RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 H7C0S8 307 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 VILLO15195 856 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 PFDN6O15212 129 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 MAGEC1O60732 1142 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 SNX2O60749 519 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 FAM155BO75949 473 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 TRIM16O95361 564 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 RETP07949 1114 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 RALBP11234 206 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 ACP5P13686 325 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 ZNF7P17097 686 aaPredicted RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 KELP23276 732 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 ARNTP27540 789 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 TNFRSF8P28908 595 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 STX2P32856 288 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 PHBP35232 272 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 TRIM23P36406 574 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 PPARGP37231 505 aaPredicted RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 ARCN1P48444 511 aaKnown RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 KIAA1024LP59773 190 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 SRP54P61011 504 aaKnown RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 YPEL5P62699 121 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 IRX4P78413 519 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 ACVR1Q04771 509 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 BNIP3Q12983 259 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 GRIK2Q13002 908 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 EIF2B5Q13144 721 aaKnown RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 FZD2Q14332 565 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 INSCQ1MX18 579 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 ALG11Q2TAA5 492 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 UAP1L1Q3KQV9 507 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 KBTBD12Q3ZCT8 623 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 GPR33Q49SQ1 333 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 AASDHQ4L235 1098 aaPredicted RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 ZNF789Q5FWF6 425 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 AARS2Q5JTZ9 985 aaKnown RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 STEAP4Q687X5 459 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 PTRHD1Q6GMV3 140 aaKnown RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 WDR93Q6P2C0 686 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 CNSTQ6PJW8 725 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 NAPRTQ6XQN6 538 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 MACC1Q6ZN28 852 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 GALNT13Q8IUC8 556 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 RAVER1Q8IY67 606 aaKnown RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 PHACTR4Q8IZ21 702 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 KRT222Q8N1A0 295 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 SLC22A18ASQ8N1D0 253 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 NXPE1Q8N323 547 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 CLDN19Q8N6F1 224 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 GPATCH11Q8N954 259 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 RASGEF1AQ8N9B8 481 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 CCL4L1Q8NHW4 92 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 GABPB2Q8TAK5 448 aaPredicted RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 CEP76Q8TAP6 659 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 CALML6Q8TD86 181 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 LMX1AQ8TE12 382 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 OR1E3Q8WZA6 343 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 CDKL2Q92772 493 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 SGF29Q96ES7 293 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 PDXPQ96GD0 296 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 LOXL4Q96JB6 756 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 VPS35Q96QK1 796 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 FAM167BQ9BTA0 163 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 TEX101Q9BY14 249 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 FAM129AQ9BZQ8 928 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 CLPBQ9H078 707 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 TSPYL1Q9H0U9 437 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 KCNH6Q9H252 994 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 CCDC68Q9H2F9 335 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 TCEAL2Q9H3H9 227 aaPredicted RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 OSGEPL1Q9H4B0 414 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 GAREM1Q9H706 876 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 IL21RQ9HBE5 538 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 PLAC1Q9HBJ0 212 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 TRIM39Q9HCM9 518 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 FGF22Q9HCT0 170 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 SARS2Q9NP81 518 aaKnown RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 SMYD2Q9NRG4 433 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 TM7SF3Q9NS93 570 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 TXNDC16Q9P2K2 825 aa5.55□□□□□ -1.52
COPS3-208ENST00000486032 NFKBIL1Q9UBC1 381 aaPredicted RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 APOBEC3BQ9UH17 382 aaKnown RBP5.55□□□□□ -1.52
COPS3-208ENST00000486032 FBXO5Q9UKT4 447 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms