RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 PLCL1Q15111 1095 aa16.78■□□□□ 0.28
SMC4-216ENST00000485645 TAF1AQ15573 450 aaPredicted RBP16.78■□□□□ 0.28
SMC4-216ENST00000485645 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.78■□□□□ 0.28
SMC4-216ENST00000485645 FNBP1LQ5T0N5 605 aa16.78■□□□□ 0.28
SMC4-216ENST00000485645 ATP1A1-AS1Q5TC04 95 aa16.78■□□□□ 0.28
SMC4-216ENST00000485645 METRNLQ641Q3 311 aa16.78■□□□□ 0.28
SMC4-216ENST00000485645 DET1Q7L5Y6 550 aa16.78■□□□□ 0.28
SMC4-216ENST00000485645 OR4K2Q8NGD2 314 aa16.78■□□□□ 0.28
SMC4-216ENST00000485645 UBXN4Q92575 508 aa16.78■□□□□ 0.28
SMC4-216ENST00000485645 PDE7BQ9NP56 450 aa16.78■□□□□ 0.28
SMC4-216ENST00000485645 IMP3Q9NV31 184 aaKnown RBP16.78■□□□□ 0.28
SMC4-216ENST00000485645 SEMA5BQ9P283 1151 aa16.78■□□□□ 0.28
SMC4-216ENST00000485645 LNPEPQ9UIQ6 1025 aa16.78■□□□□ 0.28
SMC4-216ENST00000485645 AAR2Q9Y312 384 aaKnown RBP16.78■□□□□ 0.28
SMC4-216ENST00000485645 IGHV5-51A0A0C4DH38 117 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 MACROD2A1Z1Q3 448 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 KLHL33A6NCF5 533 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 GOLGA6L3A6NEY3 463 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 MT-ND3P03897 115 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 MTHFD1P11586 935 aaKnown RBP16.77■□□□□ 0.28
SMC4-216ENST00000485645 CTNNA2P26232 953 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 CTNNA1P35221 906 aaKnown RBP16.77■□□□□ 0.28
SMC4-216ENST00000485645 PPP1CAP62136 330 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 OTUD4Q01804 1114 aaKnown RBP16.77■□□□□ 0.28
SMC4-216ENST00000485645 PRPSAP1Q14558 356 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 RANBP10Q6VN20 620 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 BEND7Q8N7W2 519 aaPredicted RBP16.77■□□□□ 0.28
SMC4-216ENST00000485645 SIDT2Q8NBJ9 832 aaKnown RBP16.77■□□□□ 0.28
SMC4-216ENST00000485645 ACTL9Q8TC94 416 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 SLC41A2Q96JW4 573 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 GORASP1Q9BQQ3 440 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 ASB8Q9H765 288 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 ZNF71Q9NQZ8 489 aaPredicted RBP16.77■□□□□ 0.28
SMC4-216ENST00000485645 KCND3Q9UK17 655 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 RARRES3Q9UL19 164 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 ACSL5Q9ULC5 683 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 PADI1Q9ULC6 663 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 EFR3BQ9Y2G0 817 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 KCTD3Q9Y597 815 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 PCDHA3Q9Y5H8 950 aa16.77■□□□□ 0.28
SMC4-216ENST00000485645 C5orf60A6NFR6 353 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 MGAT4DA6NG13 374 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 KATNA1O75449 491 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 SRP72O76094 671 aaKnown RBP16.76■□□□□ 0.27
SMC4-216ENST00000485645 STK10O94804 968 aaKnown RBP16.76■□□□□ 0.27
SMC4-216ENST00000485645 ADRA1AP35348 466 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 ARL4DP49703 201 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 ACY1Q03154 408 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 TUBB3Q13509 450 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 SKIDA1Q1XH10 827 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 ANKRD20A2Q5SQ80 823 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 ANKRD20A1Q5TYW2 823 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 ANKRD20A3Q5VUR7 823 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 CDKL3Q8IVW4 592 aaPredicted RBP16.76■□□□□ 0.27
SMC4-216ENST00000485645 OR2L2Q8NH16 312 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 ZFPM2Q8WW38 1151 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 ABHD17AQ96GS6 310 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 CALR3Q96L12 384 aaKnown RBP16.76■□□□□ 0.27
SMC4-216ENST00000485645 C12orf66Q96MD2 445 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 INSM2Q96T92 566 aaPredicted RBP16.76■□□□□ 0.27
SMC4-216ENST00000485645 MAP3K3Q99759 626 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 APOL2Q9BQE5 337 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 WWP1Q9H0M0 922 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 FKBPLQ9UIM3 349 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 ANAPC2Q9UJX6 822 aa16.76■□□□□ 0.27
SMC4-216ENST00000485645 CFAP20Q9Y6A4 193 aaKnown RBP16.76■□□□□ 0.27
SMC4-216ENST00000485645 UBA6A0AVT1 1052 aaPredicted RBP16.75■□□□□ 0.27
SMC4-216ENST00000485645 TLCD2A6NGC4 264 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 KCNN4O15554 427 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 ARHGAP6O43182 974 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 CRTAMO95727 393 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 RBP3P10745 1247 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 PYGMP11217 842 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 FOLR1P15328 257 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 PSMB4P28070 264 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 CETN2P41208 172 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 NAP1L1P55209 391 aaKnown RBP16.75■□□□□ 0.27
SMC4-216ENST00000485645 EIF3EP60228 445 aaKnown RBP16.75■□□□□ 0.27
SMC4-216ENST00000485645 PDE1BQ01064 536 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 OLIG2Q13516 323 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 ERV3-1Q14264 604 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 KCNAB1Q14722 419 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 DNTTIP2Q5QJE6 756 aaKnown RBP16.75■□□□□ 0.27
SMC4-216ENST00000485645 DARS2Q6PI48 645 aaKnown RBP16.75■□□□□ 0.27
SMC4-216ENST00000485645 BPHLQ86WA6 291 aaPredicted RBP16.75■□□□□ 0.27
SMC4-216ENST00000485645 KMT5CQ86Y97 462 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 DCUN1D1Q96GG9 259 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 FCRL4Q96PJ5 515 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 CD180Q99467 661 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 OSBPL8Q9BZF1 889 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 LHX9Q9NQ69 397 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 HRASLS2Q9NWW9 162 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 FAM8A1Q9UBU6 413 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 CRLS1Q9UJA2 301 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 POLHQ9Y253 713 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 KCNMB2Q9Y691 235 aa16.75■□□□□ 0.27
SMC4-216ENST00000485645 EPN1Q9Y6I3 576 aaPredicted RBP16.75■□□□□ 0.27
SMC4-216ENST00000485645 CCDC66A2RUB6 948 aa16.74■□□□□ 0.27
SMC4-216ENST00000485645 OR5K3A6NET4 321 aa16.74■□□□□ 0.27
SMC4-216ENST00000485645 PJA2O43164 708 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms