RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	WDR37	Q9Y2I8	494 aa		10.38	□□□□□ -0.75
HMGN1-215	ENST00000485550	F8	P00451	2351 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	hCG_1818297	A0A087WSY0	165 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	OR2AG2	A6NM03	316 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	GPR89A	B7ZAQ6	455 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	PSTPIP1	O43586	416 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	POP7	O75817	140 aa	Known RBP	10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	AGT	P01019	485 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	PDGFA	P04085	211 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	FURIN	P09958	794 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	GPR89B	P0CG08	455 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	ZNF28	P17035	718 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	F8A1	P23610	371 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	PBLD	P30039	288 aa	Predicted RBP	10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	HMGCL	P35914	325 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	SPAM1	P38567	509 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	CTSC	P53634	463 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	ABHD18	Q0P651	414 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	ERV3-1	Q14264	604 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	GPR18	Q14330	331 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	TCEAL1	Q15170	157 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	SLC14A2	Q15849	920 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	TAZ	Q16635	292 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	IRGC	Q6NXR0	463 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	TMEM220	Q6QAJ8	160 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	ABRAXAS1	Q6UWZ7	409 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	FAM92B	Q6ZTR7	304 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	GLT6D1	Q7Z4J2	308 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	C11orf96	Q7Z7L8	435 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	SRRM1	Q8IYB3	904 aa	Known RBP	10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	RCOR2	Q8IZ40	523 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	TC2N	Q8N9U0	490 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	AVL9	Q8NBF6	648 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	KRT35	Q92764	455 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	VPS35	Q96QK1	796 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	FCRL5	Q96RD9	977 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	SRPK1	Q96SB4	655 aa	Known RBP	10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	ZPBP	Q9BS86	351 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	TRIM5	Q9C035	493 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	EPB41L1	Q9H4G0	881 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	SLC40A1	Q9NP59	571 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	CASS4	Q9NQ75	786 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	IL17C	Q9P0M4	197 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	RSPH14	Q9UHP6	348 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	TSR3	Q9UJK0	312 aa	Known RBP	10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	TLK1	Q9UKI8	766 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	KCTD3	Q9Y597	815 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	PCDHA13	Q9Y5I0	950 aa		10.37	□□□□□ -0.75
HMGN1-215	ENST00000485550	CSMD1	Q96PZ7	3565 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	MN1	Q10571	1320 aa	Predicted RBP	10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	ZGRF1	Q86YA3	2104 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	FBN2	P35556	2912 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	GLYATL1P3	A0A0U1RQE8	302 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550		H7C0C1	242 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	CLDN1	O95832	211 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	DLGAP3	O95886	979 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	C9	P02748	559 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	VCL	P18206	1134 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	RBL1	P28749	1068 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	TNFRSF8	P28908	595 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	ATP5O	P48047	213 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	PRSS12	P56730	875 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	OLIG2	Q13516	323 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	SLC1A5	Q15758	541 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	EIF2S3L	Q2VIR3	472 aa	Known RBP	10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	TFDP3	Q5H9I0	405 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	CCDC181	Q5TID7	509 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	CACHD1	Q5VU97	1274 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	DET1	Q7L5Y6	550 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	TMEM135	Q86UB9	458 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	AMZ2	Q86W34	360 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	RASGRP3	Q8IV61	690 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	KATNAL2	Q8IYT4	538 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	BEND7	Q8N7W2	519 aa	Predicted RBP	10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	RASGEF1A	Q8N9B8	481 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	OR6C1	Q96RD1	312 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	FAM118B	Q9BPY3	351 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	APOL2	Q9BQE5	337 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	FICD	Q9BVA6	458 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	ULBP3	Q9BZM4	244 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	TRABD	Q9H4I3	376 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	UCK1	Q9HA47	277 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	POT1	Q9NUX5	634 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	CUEDC1	Q9NWM3	386 aa	Predicted RBP	10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	SIDT1	Q9NXL6	827 aa	Known RBP	10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	FAM8A1	Q9UBU6	413 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	PKP3	Q9Y446	797 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	TMEM184B	Q9Y519	407 aa	Predicted RBP	10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	PCDHB3	Q9Y5E6	796 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	ARL5A	Q9Y689	179 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	CFAP20	Q9Y6A4	193 aa	Known RBP	10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	RPS6KL1	Q9Y6S9	549 aa		10.36	□□□□□ -0.75
HMGN1-215	ENST00000485550	MED13L	Q71F56	2210 aa		10.35	□□□□□ -0.75
HMGN1-215	ENST00000485550	PIKFYVE	Q9Y2I7	2098 aa		10.35	□□□□□ -0.75
HMGN1-215	ENST00000485550	MACROD2	A1Z1Q3	448 aa		10.35	□□□□□ -0.75
HMGN1-215	ENST00000485550	GAPDHS	O14556	408 aa	Predicted RBP	10.35	□□□□□ -0.75
HMGN1-215	ENST00000485550	STX7	O15400	261 aa	Known RBP	10.35	□□□□□ -0.75
HMGN1-215	ENST00000485550	KATNA1	O75449	491 aa		10.35	□□□□□ -0.75
HMGN1-215	ENST00000485550	RFPL1	O75677	317 aa		10.35	□□□□□ -0.75
HMGN1-215	ENST00000485550	DNAJB5	O75953	348 aa		10.35	□□□□□ -0.75

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