RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 FAM114A2Q9NRY5 505 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 RUVBL2Q9Y230 463 aaKnown RBP11.66□□□□□ -0.54
APTX-227ENST00000485479 COL5A1P20908 1838 aaPredicted RBP11.65□□□□□ -0.54
APTX-227ENST00000485479 A6NCN8 305 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 CXorf49A8MYA2 514 aaPredicted RBP11.65□□□□□ -0.54
APTX-227ENST00000485479 GPR89AB7ZAQ6 455 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 S1PR4O95977 384 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 FTH1P19P0C7X4 201 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 GPR89BP0CG08 455 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 CUL1Q13616 776 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 ITIH4Q14624 930 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 INAVAQ3KP66 663 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 BCL7AQ4VC05 210 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 AARS2Q5JTZ9 985 aaKnown RBP11.65□□□□□ -0.54
APTX-227ENST00000485479 STEAP4Q687X5 459 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 DHRS13Q6UX07 377 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 PACS1Q6VY07 963 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 CERS6Q6ZMG9 384 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 VRK3Q8IV63 474 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 GPR156Q8NFN8 814 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 CCDC74AQ96AQ1 378 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 MRRFQ96E11 262 aaKnown RBP11.65□□□□□ -0.54
APTX-227ENST00000485479 FMO2Q99518 471 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 TIMM29Q9BSF4 260 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 P2RY12Q9H244 342 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 LRRC4CQ9HCJ2 640 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 CIDEBQ9UHD4 219 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 FBXO5Q9UKT4 447 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 PADI4Q9UM07 663 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 RNF215Q9Y6U7 377 aa11.65□□□□□ -0.54
APTX-227ENST00000485479 TCRBV9S1A1TA0A576 114 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 KRT87PA6NCN2 255 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 MGAT4DA6NG13 374 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 PRR19A6NJB7 356 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 PRMT5O14744 637 aaPredicted RBP11.65□□□□□ -0.55
APTX-227ENST00000485479 TPP1O14773 563 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 PPM1DO15297 605 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 ACSL3O95573 720 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 TTC4O95801 387 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 F3P13726 295 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 SPINK2P20155 84 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 CCR7P32248 378 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 ACADVLP49748 655 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 CAV1Q03135 178 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 HSPA14Q0VDF9 509 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 KYNUQ16719 465 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 RBM20Q5T481 1227 aaKnown RBP11.65□□□□□ -0.55
APTX-227ENST00000485479 TEDDM1Q5T9Z0 273 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 PTRHD1Q6GMV3 140 aaKnown RBP11.65□□□□□ -0.55
APTX-227ENST00000485479 ZNF549Q6P9A3 640 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 C3orf62Q6ZUJ4 267 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 EFL1Q7Z2Z2 1120 aaKnown RBP11.65□□□□□ -0.55
APTX-227ENST00000485479 SDCCAG8Q86SQ7 713 aaPredicted RBP11.65□□□□□ -0.55
APTX-227ENST00000485479 ARL14Q8N4G2 192 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 ACVR1CQ8NER5 493 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 GPR150Q8NGU9 434 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 OR2L2Q8NH16 312 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 GSDMBQ8TAX9 411 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 IFI44Q8TCB0 444 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 LRRC39Q96DD0 335 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 SGSM3Q96HU1 749 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 SLC30A3Q99726 388 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 CCM2Q9BSQ5 444 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 WWP1Q9H0M0 922 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 ANKZF1Q9H8Y5 726 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 COG4Q9H9E3 785 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 VPS37BQ9H9H4 285 aa11.65□□□□□ -0.55
APTX-227ENST00000485479 IMP3Q9NV31 184 aaKnown RBP11.65□□□□□ -0.55
APTX-227ENST00000485479 ZNF624Q9P2J8 865 aaPredicted RBP11.65□□□□□ -0.55
APTX-227ENST00000485479 FAM149AA5PLN7 773 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 TNFSF14O43557 240 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 FAM155BO75949 473 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 OR56A5P0C7T3 313 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 CKMT1AP12532 417 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 CEACAM1P13688 526 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 CKMT2P17540 419 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 OGNP20774 298 aaKnown RBP11.64□□□□□ -0.55
APTX-227ENST00000485479 CSRP1P21291 193 aaKnown RBP11.64□□□□□ -0.55
APTX-227ENST00000485479 ALDH4A1P30038 563 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 PUM1Q14671 1186 aaKnown RBP eCLIP11.64□□□□□ -0.55
APTX-227ENST00000485479 NR0B2Q15466 257 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 ZNF658BQ4V348 819 aaPredicted RBP11.64□□□□□ -0.55
APTX-227ENST00000485479 C14orf28Q4W4Y0 310 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 NKAIN2Q5VXU1 208 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 PIM3Q86V86 326 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 SDR16C5Q8N3Y7 309 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 RMDN2Q96LZ7 410 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 TTC1Q99614 292 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 NAT9Q9BTE0 207 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 RDH14Q9HBH5 336 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 RRAGDQ9NQL2 400 aaPredicted RBP11.64□□□□□ -0.55
APTX-227ENST00000485479 ZFATQ9P243 1243 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 LRIT1Q9P2V4 623 aa11.64□□□□□ -0.55
APTX-227ENST00000485479 NDC80O14777 642 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 SLU7O95391 586 aaKnown RBP11.63□□□□□ -0.55
APTX-227ENST00000485479 AHSGP02765 367 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 VCLP18206 1134 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 SAT1P21673 171 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 IDSP22304 550 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 SLC19A1P41440 591 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms