RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 CYHR1Q6ZMK1 362 aa14.29□□□□□ -0.12
LRIF1-202ENST00000485275 FAM83HQ6ZRV2 1179 aaPredicted RBP14.29□□□□□ -0.12
LRIF1-202ENST00000485275 CCDC91Q7Z6B0 441 aa14.29□□□□□ -0.12
LRIF1-202ENST00000485275 ABI3BPQ7Z7G0 1075 aa14.29□□□□□ -0.12
LRIF1-202ENST00000485275 LCA5Q86VQ0 697 aa14.29□□□□□ -0.12
LRIF1-202ENST00000485275 SNX19Q92543 992 aa14.29□□□□□ -0.12
LRIF1-202ENST00000485275 ELMO1Q92556 727 aa14.29□□□□□ -0.12
LRIF1-202ENST00000485275 DLG3Q92796 817 aa14.29□□□□□ -0.12
LRIF1-202ENST00000485275 PDXPQ96GD0 296 aa14.29□□□□□ -0.12
LRIF1-202ENST00000485275 SLC6A18Q96N87 628 aa14.29□□□□□ -0.12
LRIF1-202ENST00000485275 ATOH8Q96SQ7 321 aa14.29□□□□□ -0.12
LRIF1-202ENST00000485275 SYTL2Q9HCH5 934 aa14.29□□□□□ -0.12
LRIF1-202ENST00000485275 COPG2Q9UBF2 871 aa14.29□□□□□ -0.12
LRIF1-202ENST00000485275 ADAMTS6Q9UKP5 1117 aa14.29□□□□□ -0.12
LRIF1-202ENST00000485275 SLC17A4Q9Y2C5 497 aa14.29□□□□□ -0.12
LRIF1-202ENST00000485275 ST14Q9Y5Y6 855 aa14.29□□□□□ -0.12
LRIF1-202ENST00000485275 SLC5A10A0PJK1 596 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 SCAMP1O15126 338 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 MAGEC1O60732 1142 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 FTH1P02794 183 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 AKT2P31751 481 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 KIAA1024LP59773 190 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 IL2P60568 153 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 RPL6Q02878 288 aaKnown RBP14.28□□□□□ -0.12
LRIF1-202ENST00000485275 SRSF5Q13243 272 aaKnown RBP14.28□□□□□ -0.12
LRIF1-202ENST00000485275 ACAP2Q15057 778 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 CCDC153Q494R4 210 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 AGAP9Q5VTM2 703 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 UGT3A1Q6NUS8 523 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 SBSNQ6UWP8 590 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 NKAPQ8N5F7 415 aaKnown RBP14.28□□□□□ -0.12
LRIF1-202ENST00000485275 OR13H1Q8NG92 308 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 MOCOSQ96EN8 888 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 LINC00615Q96LM1 132 aaPredicted RBP14.28□□□□□ -0.12
LRIF1-202ENST00000485275 CCM2Q9BSQ5 444 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 ACSS2Q9NR19 701 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 GPR27Q9NS67 375 aa14.28□□□□□ -0.12
LRIF1-202ENST00000485275 ANKRD12Q6UB98 2062 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 METTL12A8MUP2 240 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 PRAMEF26H0Y7S4 382 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 BTN3A1O00481 513 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 BPGMP07738 259 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 MTHFD2P13995 350 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 MAOBP27338 520 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 PDHA2P29803 388 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 ALDH3A1P30838 453 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 HOXA6P31267 233 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 HK3P52790 923 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 GTF2H3Q13889 308 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 NFE2L1Q14494 772 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 NFATC4Q14934 902 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 PPP1R3AQ16821 1122 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 HHATQ5VTY9 493 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 ATG14Q6ZNE5 492 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 C10orf107Q8IVU9 208 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 CKAP2Q8WWK9 683 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 OR1E3Q8WZA6 343 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 KIAA1191Q96A73 305 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 PDLIM5Q96HC4 596 aaKnown RBP14.27□□□□□ -0.12
LRIF1-202ENST00000485275 SCYL1Q96KG9 808 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 CAPS2Q9BXY5 557 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 MRPL46Q9H2W6 279 aaKnown RBP14.27□□□□□ -0.12
LRIF1-202ENST00000485275 SIRPGQ9P1W8 387 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 KLHL42Q9P2K6 505 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 SUFUQ9UMX1 484 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 GPR34Q9UPC5 381 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 PLEKHM1Q9Y4G2 1056 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 KMT2EQ8IZD2 1858 aa14.27□□□□□ -0.12
LRIF1-202ENST00000485275 TNRC6BQ9UPQ9 1833 aaKnown RBP14.27□□□□□ -0.12
LRIF1-202ENST00000485275 GON4LQ3T8J9 2241 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 KRT87PA6NCN2 255 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 CACNB4O00305 520 aaPredicted RBP14.27□□□□□ -0.13
LRIF1-202ENST00000485275 QSOX1O00391 747 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 GPR37L1O60883 481 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 SHOX2O60902 331 aaPredicted RBP14.27□□□□□ -0.13
LRIF1-202ENST00000485275 NDUFS2O75306 463 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 POP7O75817 140 aaKnown RBP14.27□□□□□ -0.13
LRIF1-202ENST00000485275 SLCO2B1O94956 709 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 HOXC4P09017 264 aaPredicted RBP14.27□□□□□ -0.13
LRIF1-202ENST00000485275 FGF3P11487 239 aaPredicted RBP14.27□□□□□ -0.13
LRIF1-202ENST00000485275 BGNP21810 368 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 GNGT1P63211 74 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 PLEKHS1Q5SXH7 462 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 ZCCHC23Q6ZST2 131 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 TAX1BP1Q86VP1 789 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 C1orf210Q8IVY1 113 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 TMEFF1Q8IYR6 380 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 OXR1Q8N573 874 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 CCDC63Q8NA47 563 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 CADM4Q8NFZ8 388 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 SCARF2Q96GP6 870 aaPredicted RBP14.27□□□□□ -0.13
LRIF1-202ENST00000485275 HSPA12BQ96MM6 686 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 MRPL57Q9BQC6 102 aaKnown RBP14.27□□□□□ -0.13
LRIF1-202ENST00000485275 TFB2MQ9H5Q4 396 aaKnown RBP14.27□□□□□ -0.13
LRIF1-202ENST00000485275 COG4Q9H9E3 785 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 EIF2B4Q9UI10 523 aaKnown RBP14.27□□□□□ -0.13
LRIF1-202ENST00000485275 DMTF1Q9Y222 760 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 HS3ST3A1Q9Y663 406 aa14.27□□□□□ -0.13
LRIF1-202ENST00000485275 TP53BP1Q12888 1972 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms