RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 DDAH2O95865 285 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 MT-CYBP00156 380 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-227ENST00000485102 RAB40ALP0C0E4 278 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 MSL3P1P0C860 447 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 GJC1P36383 396 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 ZNF75DP51815 510 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 GSDMDP57764 484 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 PPP1CAP62136 330 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 LDLRAP1Q5SW96 308 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 LRRC38Q5VT99 294 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 FAM199XQ6PEV8 388 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-227ENST00000485102 TTC30BQ8N4P2 665 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 BEND7Q8N7W2 519 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-227ENST00000485102 DDHD1Q8NEL9 900 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 GPR150Q8NGU9 434 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 SPATA22Q8NHS9 363 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 CTNNBL1Q8WYA6 563 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-227ENST00000485102 RNF31Q96EP0 1072 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 TEKT5Q96M29 485 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 RUFY1Q96T51 708 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 GRPEL1Q9HAV7 217 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 ACSS2Q9NR19 701 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 SMOXQ9NWM0 555 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 HACD3Q9P035 362 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 BTRCQ9Y297 605 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 ZNF451Q9Y4E5 1061 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 HEY1Q9Y5J3 304 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 A0A0A6YYK5 440 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-227ENST00000485102 SSU72P8A0A1W2PR75 194 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 LRRD1A4D1F6 860 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 AKR1B15C9JRZ8 316 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-227ENST00000485102 APOL1O14791 398 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 KLK3P07288 261 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-227ENST00000485102 EBLN1P0CF75 366 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 MTHFD1P11586 935 aaKnown RBP12.71□□□□□ -0.37
HDAC6-227ENST00000485102 CTSCP53634 463 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 GPS2Q13227 327 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 IL10RAQ13651 578 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 GSE1Q14687 1217 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 KCNAB1Q14722 419 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 CHRNA6Q15825 494 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 PCSK7Q16549 785 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 SLC18A3Q16572 532 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 NADK2Q4G0N4 442 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 DNTTIP2Q5QJE6 756 aaKnown RBP12.71□□□□□ -0.37
HDAC6-227ENST00000485102 BZW1Q7L1Q6 419 aaKnown RBP12.71□□□□□ -0.37
HDAC6-227ENST00000485102 TXLNBQ8N3L3 684 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 RASGEF1AQ8N9B8 481 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 SLC38A9Q8NBW4 561 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 GDAP1Q8TB36 358 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-227ENST00000485102 MAK16Q9BXY0 300 aaKnown RBP12.71□□□□□ -0.37
HDAC6-227ENST00000485102 NLNQ9BYT8 704 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 CEP41Q9BYV8 373 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 SYTL2Q9HCH5 934 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 BPIFA1Q9NP55 256 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 LUC7LQ9NQ29 371 aaKnown RBP12.71□□□□□ -0.37
HDAC6-227ENST00000485102 HRASLS2Q9NWW9 162 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 TRIM10Q9UDY6 481 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 FAM153AQ9UHL3 310 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 ACSL5Q9ULC5 683 aa12.71□□□□□ -0.37
HDAC6-227ENST00000485102 CNTRLQ7Z7A1 2325 aa12.71□□□□□ -0.38
HDAC6-227ENST00000485102 UBA6A0AVT1 1052 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-227ENST00000485102 WIPF3A6NGB9 483 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 MEN1O00255 615 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 DPM1O60762 260 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 SCRG1O75711 98 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 PYGMP11217 842 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 PTPN3P26045 913 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 SPAM1P38567 509 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 ARHGAP25P42331 645 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 NR2C2P49116 596 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 ARL4DP49703 201 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 CCL11P51671 97 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 RPS18P62269 152 aaKnown RBP12.7□□□□□ -0.38
HDAC6-227ENST00000485102 ITGA9Q13797 1035 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 INPP5JQ15735 1006 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-227ENST00000485102 ASTE1Q2TB18 679 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-227ENST00000485102 PLEKHS1Q5SXH7 462 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 TMTC4Q5T4D3 741 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 ZFYVE27Q5T4F4 411 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 CPZQ66K79 652 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 TMEM220Q6QAJ8 160 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 KDELC1Q6UW63 502 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 CERS6Q6ZMG9 384 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 FAM83HQ6ZRV2 1179 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-227ENST00000485102 OOSP2Q86WS3 158 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 DSELQ8IZU8 1212 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 TMEM102Q8N9M5 508 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-227ENST00000485102 GLIS1Q8NBF1 620 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 LINC00615Q96LM1 132 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-227ENST00000485102 CHST8Q9H2A9 424 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 KIR3DX1Q9H7L2 352 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 SLC24A2Q9UI40 661 aa12.7□□□□□ -0.38
HDAC6-227ENST00000485102 PIKFYVEQ9Y2I7 2098 aa12.69□□□□□ -0.38
HDAC6-227ENST00000485102 MGAT4DA6NG13 374 aa12.69□□□□□ -0.38
HDAC6-227ENST00000485102 ARGFXA6NJG6 315 aa12.69□□□□□ -0.38
HDAC6-227ENST00000485102 GAPDHSO14556 408 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-227ENST00000485102 UGT1A9O60656 530 aa12.69□□□□□ -0.38
HDAC6-227ENST00000485102 SEMA7AO75326 666 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms