RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 EHD2Q9NZN4 543 aa2.9□□□□□ -1.95
VPS50-216ENST00000484954 DBNLQ9UJU6 430 aaKnown RBP2.9□□□□□ -1.95
VPS50-216ENST00000484954 CORO1CQ9ULV4 474 aaPredicted RBP2.9□□□□□ -1.95
VPS50-216ENST00000484954 TMEM98Q9Y2Y6 226 aa2.9□□□□□ -1.95
VPS50-216ENST00000484954 OR6C76A6NM76 312 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 ZNF197O14709 1029 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 CLPTM1O96005 669 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 HIST1H2ABP04908 130 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 TPOP07202 933 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 HSPA1AP0DMV8 641 aaKnown RBP2.89□□□□□ -1.95
VPS50-216ENST00000484954 HSPA1BP0DMV9 641 aaKnown RBP2.89□□□□□ -1.95
VPS50-216ENST00000484954 KRT5P13647 590 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 HIST1H2ADP20671 130 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 MPP1Q00013 466 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 TFAP4Q01664 338 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 ITGA9Q13797 1035 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 PCGF3Q3KNV8 242 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 MMS22LQ6ZRQ5 1243 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 TMTC3Q6ZXV5 915 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 HIST3H2AQ7L7L0 130 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 ISCA2Q86U28 154 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 L3MBTL4Q8NA19 623 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 PPM1MQ96MI6 270 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 SLC22A12Q96S37 553 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 PSMD1Q99460 953 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 DDOQ99489 341 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 EGFL8Q99944 293 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 ITPAQ9BY32 194 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 PAK5Q9P286 719 aa2.89□□□□□ -1.95
VPS50-216ENST00000484954 A0A1W2PR77 199 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 FRMD3A2A2Y4 597 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 C15orf62A8K5M9 175 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 A8MZ25 164 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 GPR137BO60478 399 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 TRMUO75648 421 aaKnown RBP2.88□□□□□ -1.95
VPS50-216ENST00000484954 ZFAND5O76080 213 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 TMEM63AO94886 807 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 CSPG5O95196 566 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 CCNDBP1O95273 360 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 OR2C1O95371 312 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 CD4P01730 458 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 ITGA3P26006 1051 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 NMBRP28336 390 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 MAPK4P31152 587 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 WNT5AP41221 380 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 CDH11P55287 796 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 SP3Q02447 781 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 LRMPQ12912 555 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 TUBB2AQ13885 445 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 ZSCAN23Q3MJ62 389 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 GTDC1Q4AE62 458 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 SNX30Q5VWJ9 437 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 ZDHHC20Q5W0Z9 365 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 JADE1Q6IE81 842 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 EXOC8Q8IYI6 725 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 SCML4Q8N228 414 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 WDTC1Q8N5D0 677 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 PDILTQ8N807 584 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 ZNF383Q8NA42 475 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 NAXEQ8NCW5 288 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 ZNF689Q96CS4 500 aaPredicted RBP2.88□□□□□ -1.95
VPS50-216ENST00000484954 POM121L2Q96KW2 1035 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 C7orf26Q96N11 449 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 OPRPNQ99935 248 aaPredicted RBP2.88□□□□□ -1.95
VPS50-216ENST00000484954 RTP3Q9BQQ7 232 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 SRSF8Q9BRL6 282 aaKnown RBP2.88□□□□□ -1.95
VPS50-216ENST00000484954 TUBB2BQ9BVA1 445 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 WDR13Q9H1Z4 485 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 MUC13Q9H3R2 512 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 DENND2DQ9H6A0 471 aaPredicted RBP2.88□□□□□ -1.95
VPS50-216ENST00000484954 RABGAP1Q9Y3P9 1069 aa2.88□□□□□ -1.95
VPS50-216ENST00000484954 MEIOCA2RUB1 952 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 B4E171 279 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 DNM1LO00429 736 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 SCAMP1O15126 338 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 TMCC2O75069 709 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 RNASEH2AO75792 299 aaKnown RBP2.87□□□□□ -1.95
VPS50-216ENST00000484954 SORBS2O94875 1100 aaKnown RBP2.87□□□□□ -1.95
VPS50-216ENST00000484954 PLA2G4BP0C869 781 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 GABRB1P18505 474 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 CEACAM8P31997 349 aaPredicted RBP2.87□□□□□ -1.95
VPS50-216ENST00000484954 KRT9P35527 623 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 TSPAN7P41732 249 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 PSMC4P43686 418 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 CAMPP49913 170 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 LMO4P61968 165 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 IKQ13123 557 aaPredicted RBP2.87□□□□□ -1.95
VPS50-216ENST00000484954 P2RY6Q15077 328 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 DLG2Q15700 870 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 RARS2Q5T160 578 aaKnown RBP2.87□□□□□ -1.95
VPS50-216ENST00000484954 ARHGEF16Q5VV41 709 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 ALS2CLQ60I27 953 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 PWWP2BQ6NUJ5 590 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 KLC3Q6P597 504 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 KLHL35Q6PF15 583 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 SLC16A9Q7RTY1 509 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 GTSCR1Q86UQ5 136 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 DNAJC22Q8N4W6 341 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 OR2T6Q8NHC8 308 aa2.87□□□□□ -1.95
VPS50-216ENST00000484954 DAZLQ92904 295 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms