RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 PRMT5O14744 637 aaPredicted RBP15.57■□□□□ 0.08
UPF3A-208ENST00000484246 CSO75390 466 aaKnown RBP15.57■□□□□ 0.08
UPF3A-208ENST00000484246 VAPBO95292 243 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 CPNE6O95741 557 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 RPS3P23396 243 aaKnown RBP eCLIP15.57■□□□□ 0.08
UPF3A-208ENST00000484246 SLC19A1P41440 591 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 ADARP55265 1226 aaKnown RBP15.57■□□□□ 0.08
UPF3A-208ENST00000484246 BIRC2Q13490 618 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 CLCA4Q14CN2 919 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 MRNIPQ6NTE8 343 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 CASC4Q6P4E1 433 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 LMNTD2Q8IXW0 634 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 CLDN19Q8N6F1 224 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 ZNF669Q96BR6 464 aaPredicted RBP15.57■□□□□ 0.08
UPF3A-208ENST00000484246 LRRC39Q96DD0 335 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 STAMBPL1Q96FJ0 436 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 FCRL3Q96P31 734 aaPredicted RBP15.57■□□□□ 0.08
UPF3A-208ENST00000484246 ERP44Q9BS26 406 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 ANAPC5Q9UJX4 755 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 PRSS21Q9Y6M0 314 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 RPS6KL1Q9Y6S9 549 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 COL27A1Q8IZC6 1860 aaPredicted RBP15.57■□□□□ 0.08
UPF3A-208ENST00000484246 TMEM8BA6NDV4 472 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 EFCAB8A8MWE9 144 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 LIN7AO14910 233 aaPredicted RBP15.56■□□□□ 0.08
UPF3A-208ENST00000484246 RAD51CO43502 376 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 TTC4O95801 387 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 CAPNS1P04632 268 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 OR56A5P0C7T3 313 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 PGAM1P18669 254 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 RPL10P27635 214 aaKnown RBP15.56■□□□□ 0.08
UPF3A-208ENST00000484246 CD1CP29017 333 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 PBLDP30039 288 aaPredicted RBP15.56■□□□□ 0.08
UPF3A-208ENST00000484246 RPL21P46778 160 aaKnown RBP15.56■□□□□ 0.08
UPF3A-208ENST00000484246 ITGA8P53708 1063 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 DRG2P55039 364 aaKnown RBP15.56■□□□□ 0.08
UPF3A-208ENST00000484246 PLOD1Q02809 727 aaPredicted RBP15.56■□□□□ 0.08
UPF3A-208ENST00000484246 ZFP36L1Q07352 338 aaKnown RBP15.56■□□□□ 0.08
UPF3A-208ENST00000484246 C2orf54Q08AI8 447 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 RTP5Q14D33 572 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 SEPT7Q16181 437 aaKnown RBP15.56■□□□□ 0.08
UPF3A-208ENST00000484246 RPE65Q16518 533 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 CAPRIN2Q6IMN6 1127 aaKnown RBP15.56■□□□□ 0.08
UPF3A-208ENST00000484246 CES3Q6UWW8 571 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 UNQ6494/PRO21346Q6UXR6 183 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 TMEM26Q6ZUK4 368 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 SLITRK4Q8IW52 837 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 PDIK1LQ8N165 341 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 ZFPM2Q8WW38 1151 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 NXPE2Q96DL1 559 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 LIN37Q96GY3 246 aaPredicted RBP15.56■□□□□ 0.08
UPF3A-208ENST00000484246 TMEM74Q96NL1 305 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 SLC38A3Q99624 504 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 EBNA1BP2Q99848 306 aaKnown RBP15.56■□□□□ 0.08
UPF3A-208ENST00000484246 P2RY12Q9H244 342 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 OR52A5Q9H2C5 316 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 SLC40A1Q9NP59 571 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 KCNK4Q9NYG8 393 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 WHRNQ9P202 907 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 ENTPD2Q9Y5L3 495 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 MRFAP1Q9Y605 127 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 BPTFQ12830 3046 aa15.56■□□□□ 0.08
UPF3A-208ENST00000484246 OR52A4PA6NMU1 304 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 E7ESA3 106 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 CASC3O15234 703 aaKnown RBP15.55■□□□□ 0.08
UPF3A-208ENST00000484246 DUX1O43812 170 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 OR1I1O60431 355 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 URI1O94763 535 aaPredicted RBP15.55■□□□□ 0.08
UPF3A-208ENST00000484246 VIPP01282 170 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 SLC35G4P0C7Q5 338 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 MTHFD1P11586 935 aaKnown RBP15.55■□□□□ 0.08
UPF3A-208ENST00000484246 CSF2RBP32927 897 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 CD151P48509 253 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 OR1D5P58170 312 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 DHX9Q08211 1270 aaKnown RBP15.55■□□□□ 0.08
UPF3A-208ENST00000484246 EIF3IQ13347 325 aaKnown RBP15.55■□□□□ 0.08
UPF3A-208ENST00000484246 PDAP1Q13442 181 aaKnown RBP15.55■□□□□ 0.08
UPF3A-208ENST00000484246 FRG1Q14331 258 aaKnown RBP15.55■□□□□ 0.08
UPF3A-208ENST00000484246 CRYMQ14894 314 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 HIF1AQ16665 826 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 MSS51Q4VC12 460 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 DUPD1Q68J44 220 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 NEPROQ6NW34 567 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 IGF2-ASQ6U949 168 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 SDCCAG8Q86SQ7 713 aaPredicted RBP15.55■□□□□ 0.08
UPF3A-208ENST00000484246 CILP2Q8IUL8 1156 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 TRIM48Q8IWZ4 208 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 Q8N9G6 341 aaPredicted RBP15.55■□□□□ 0.08
UPF3A-208ENST00000484246 OR10G6Q8NH81 332 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 NAT14Q8WUY8 206 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 LPGAT1Q92604 370 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 CXorf40BQ96DE9 158 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 RMDN2Q96LZ7 410 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 TRIM56Q9BRZ2 755 aaKnown RBP15.55■□□□□ 0.08
UPF3A-208ENST00000484246 CARD6Q9BX69 1037 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 TSSK1BQ9BXA7 367 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 PHACTR1Q9C0D0 580 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 INTS10Q9NVR2 710 aaKnown RBP15.55■□□□□ 0.08
UPF3A-208ENST00000484246 PDP2Q9P2J9 529 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 VPS9D1Q9Y2B5 631 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms