RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 AP2A2O94973 939 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 XPAP23025 273 aaPredicted RBP13.02□□□□□ -0.32
CPNE1-225ENST00000483495 GCKP35557 465 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 ETV3P41162 512 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 FCHO2Q0JRZ9 810 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 STX5Q13190 355 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 E2F5Q15329 346 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 RBBP7Q16576 425 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 PHKG1Q16816 387 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 C1orf146Q5VVC0 180 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 PPP2R2DQ66LE6 453 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 SULT1C3Q6IMI6 304 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 ERAP2Q6P179 960 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 LIPIQ6XZB0 460 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 GOLGA7Q7Z5G4 137 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 NRSN1Q8IZ57 195 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 ZNF366Q8N895 744 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 RHBDF1Q96CC6 855 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 TIFAQ96CG3 184 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 NSUN3Q9H649 340 aaKnown RBP13.02□□□□□ -0.32
CPNE1-225ENST00000483495 FBRSL1Q9HCM7 1045 aaKnown RBP13.02□□□□□ -0.32
CPNE1-225ENST00000483495 STX18Q9P2W9 335 aaKnown RBP13.02□□□□□ -0.32
CPNE1-225ENST00000483495 SUN2Q9UH99 717 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 SARDHQ9UL12 918 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 PTGDR2Q9Y5Y4 395 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 KIF26AQ9ULI4 1882 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-225ENST00000483495 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-225ENST00000483495 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-225ENST00000483495 CFAP99D6REC4 459 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 H0Y858 1186 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 GIPC1O14908 333 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 SGTAO43765 313 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 ANP32DO95626 131 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 CHEK2O96017 543 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 LBPP18428 481 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 GPX3P22352 226 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 ITGB7P26010 798 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 ERVPABLB-1P60509 514 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 GTF2H2Q13888 395 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 C18orf21Q32NC0 220 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-225ENST00000483495 PREPLQ4J6C6 727 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-225ENST00000483495 PLEKHS1Q5SXH7 462 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 ICE2Q659A1 982 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 TANGO2Q6ICL3 276 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 GTF2H2CQ6P1K8 395 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 VITQ6UXI7 678 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 GK5Q6ZS86 529 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 DDIASQ8IXT1 998 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 OR52B6Q8NGF0 335 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 STMN2Q93045 179 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 DCUN1D1Q96GG9 259 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 VPS35Q96QK1 796 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 ABCG8Q9H221 673 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 TMEM245Q9H330 911 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 NOL11Q9H8H0 719 aaKnown RBP13.02□□□□□ -0.33
CPNE1-225ENST00000483495 ZFP14Q9HCL3 533 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 PFDN4Q9NQP4 134 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 MBD1Q9UIS9 605 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-225ENST00000483495 MSRAQ9UJ68 235 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 TSR3Q9UJK0 312 aaKnown RBP13.02□□□□□ -0.33
CPNE1-225ENST00000483495 CDH7Q9ULB5 785 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 PPM1HQ9ULR3 514 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 TIMM22Q9Y584 194 aa13.02□□□□□ -0.33
CPNE1-225ENST00000483495 TRANK1O15050 2925 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 PLXNA2O75051 1894 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 FADS2P1A8MWK0 482 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 H0Y3Z8 333 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 OR7A17O14581 309 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 KPNA5O15131 536 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 SPINT1O43278 529 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 ENO2P09104 434 aaPredicted RBP13.01□□□□□ -0.33
CPNE1-225ENST00000483495 LINC00032P0C843 101 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 MPC1LP0DKB6 136 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 STX1BP61266 288 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 CDKL1Q00532 357 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 GRB7Q14451 532 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 ELAVL3Q14576 367 aaKnown RBP13.01□□□□□ -0.33
CPNE1-225ENST00000483495 RCN1Q15293 331 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 RAB30Q15771 203 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 GSTA3Q16772 222 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 FNDC3BQ53EP0 1204 aaKnown RBP13.01□□□□□ -0.33
CPNE1-225ENST00000483495 AGKQ53H12 422 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 LETMD1Q6P1Q0 360 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 TTC23LQ6PF05 361 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 SYCE2Q6PIF2 218 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 TERB1Q8NA31 727 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 BTN2A2Q8WVV5 523 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 OR8D1Q8WZ84 308 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 PPP2R3CQ969Q6 453 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 TUBGCP3Q96CW5 907 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 MRPL38Q96DV4 380 aaKnown RBP13.01□□□□□ -0.33
CPNE1-225ENST00000483495 TMEM79Q9BSE2 394 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 SLC25A23Q9BV35 468 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 RIOK2Q9BVS4 552 aaKnown RBP13.01□□□□□ -0.33
CPNE1-225ENST00000483495 CD244Q9BZW8 370 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 SDR39U1Q9NRG7 319 aaPredicted RBP13.01□□□□□ -0.33
CPNE1-225ENST00000483495 POMPQ9Y244 141 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 BTRCQ9Y297 605 aa13.01□□□□□ -0.33
CPNE1-225ENST00000483495 COL4A3Q01955 1670 aa13□□□□□ -0.33
CPNE1-225ENST00000483495 PDE5AO76074 875 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms