RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 PRR19A6NJB7 356 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 LGALS16A8MUM7 142 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 HTRA2O43464 458 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-207ENST00000483407 DUX1O43812 170 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 PRPSAP2O60256 369 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 RAD1O60671 282 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 NTRK1P04629 796 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 PYGLP06737 847 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 IVLP07476 585 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 THRAP10827 490 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 LIFP15018 202 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 FOSL1P15407 271 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 FERP16591 822 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 BPIP17213 487 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 GM2AP17900 193 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 TNFAIP3P21580 790 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 TEAD1P28347 426 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 ADCY8P40145 1251 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 ARL4AP40617 200 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 GPR1P46091 355 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 HCAR3P49019 387 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 OGDHQ02218 1023 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 UBXN1Q04323 297 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 MAMLD1Q13495 774 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 CNGA3Q16281 694 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 CA9Q16790 459 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 RALGPS1Q5JS13 557 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 COLEC12Q5KU26 742 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 NKAPLQ5M9Q1 402 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 ARMC12Q5T9G4 340 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 NKAIN2Q5VXU1 208 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 TMEM71Q6P5X7 295 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 CYP2R1Q6VVX0 501 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 USP45Q70EL2 814 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 PTRH1Q86Y79 214 aaKnown RBP5.83□□□□□ -1.48
CSDE1-207ENST00000483407 NRROSQ86YC3 692 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 ZDHHC13Q8IUH4 622 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 ZC3H7AQ8IWR0 971 aaKnown RBP5.83□□□□□ -1.48
CSDE1-207ENST00000483407 ARHGAP12Q8IWW6 846 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 NAGSQ8N159 534 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 NDUFAF2Q8N183 169 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 PELI3Q8N2H9 469 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 TMEM52Q8NDY8 209 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 OR10G6Q8NH81 332 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 OR2M4Q96R27 311 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 NUDCD1Q96RS6 583 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 SLC38A3Q99624 504 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 SNRNP25Q9BV90 132 aaKnown RBP5.83□□□□□ -1.48
CSDE1-207ENST00000483407 STN1Q9H668 368 aaKnown RBP5.83□□□□□ -1.48
CSDE1-207ENST00000483407 GPN2Q9H9Y4 310 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-207ENST00000483407 ERVK13-1Q9NX77 482 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 ZC3H7BQ9UGR2 993 aaKnown RBP5.83□□□□□ -1.48
CSDE1-207ENST00000483407 PCSK1NQ9UHG2 260 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 ANAPC2Q9UJX6 822 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 PHTF1Q9UMS5 762 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 SLC17A4Q9Y2C5 497 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 B3GALT1Q9Y5Z6 326 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 COL27A1Q8IZC6 1860 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-207ENST00000483407 DOCK4Q8N1I0 1966 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 NPIPB15A6NHN6 443 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-207ENST00000483407 EFCAB7A8K855 629 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 B4E171 279 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 PPM1DO15297 605 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 GPR39O43194 453 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 FUCA1P04066 466 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 ATP1A3P13637 1013 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 CR2P20023 1033 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 MIPP30301 263 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 CSF2RBP32927 897 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 SERPINB6P35237 376 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 CASRP41180 1078 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 TSPAN7P41732 249 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 FASLGP48023 281 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 COPB1P53618 953 aaKnown RBP5.82□□□□□ -1.48
CSDE1-207ENST00000483407 MC1RQ01726 317 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 EGR3Q06889 387 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 DPTQ07507 201 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 SRSF1Q07955 248 aaKnown RBP eCLIP5.82□□□□□ -1.48
CSDE1-207ENST00000483407 SLC10A7Q0GE19 358 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 LRP8Q14114 963 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 MARC1Q5VT66 337 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 PLEKHA7Q6IQ23 1121 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 DOK6Q6PKX4 331 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 TMCO3Q6UWJ1 677 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 CEACAM20Q6UY09 585 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 ARHGAP36Q6ZRI8 547 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 Q6ZVL8 140 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 KDELC2Q7Z4H8 507 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 HSD11B1LQ7Z5J1 315 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 GALNT13Q8IUC8 556 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 CREG2Q8IUH2 290 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 NLGN4XQ8N0W4 816 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 ATPAF2Q8N5M1 289 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 NPWQ8N729 165 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 NLGN4YQ8NFZ3 816 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-207ENST00000483407 OR2W6PQ8NHA6 318 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 C9orf43Q8TAL5 461 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-207ENST00000483407 FNIP1Q8TF40 1166 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 PATE1Q8WXA2 126 aa5.82□□□□□ -1.48
CSDE1-207ENST00000483407 ASB11Q8WXH4 323 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 991.6 ms