RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 PRMT5O14744 637 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-214ENST00000482733 NDUFS3O75489 264 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 CPNE6O95741 557 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 TTC4O95801 387 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 SLC35G4P0C7Q5 338 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 PGAM1P18669 254 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 ARNTP27540 789 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 SLC19A1P41440 591 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 ARCN1P48444 511 aaKnown RBP16.26■□□□□ 0.19
HMGN1-214ENST00000482733 ITGA8P53708 1063 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 PLOD1Q02809 727 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-214ENST00000482733 SQSTM1Q13501 440 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 CAMK2BQ13554 666 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 SEMA3AQ14563 771 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 LMNTD2Q8IXW0 634 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 GPR150Q8NGU9 434 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 OR10G6Q8NH81 332 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 NAT14Q8WUY8 206 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 GATA6Q92908 595 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 AHCYL2Q96HN2 611 aaKnown RBP16.26■□□□□ 0.19
HMGN1-214ENST00000482733 TMEM74Q96NL1 305 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 TRIM31Q9BZY9 425 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 COG4Q9H9E3 785 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 MARCH4Q9P2E8 410 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-214ENST00000482733 ZNF624Q9P2J8 865 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-214ENST00000482733 VPS9D1Q9Y2B5 631 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 WDR37Q9Y2I8 494 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 PRSS21Q9Y6M0 314 aa16.26■□□□□ 0.19
HMGN1-214ENST00000482733 IGHV1OR21-1A0A087WYE8 117 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 LILRA5A6NI73 299 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 OR52A4PA6NMU1 304 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 LIN7AO14910 233 aaPredicted RBP16.25■□□□□ 0.19
HMGN1-214ENST00000482733 RAD51CO43502 376 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 OR1I1O60431 355 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 OGNP20774 298 aaKnown RBP16.25■□□□□ 0.19
HMGN1-214ENST00000482733 ARL4CP56559 192 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 DHX9Q08211 1270 aaKnown RBP16.25■□□□□ 0.19
HMGN1-214ENST00000482733 CALCOCO2Q13137 446 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 THOC5Q13769 683 aaKnown RBP16.25■□□□□ 0.19
HMGN1-214ENST00000482733 CLCA4Q14CN2 919 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 RPE65Q16518 533 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 TYSND1Q2T9J0 566 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 AMZ1Q400G9 498 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 MAP9Q49MG5 647 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 NEPROQ6NW34 567 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 TMEM26Q6ZUK4 368 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 PIM3Q86V86 326 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 KIF18AQ8NI77 898 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 LRRC39Q96DD0 335 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 FCRL3Q96P31 734 aaPredicted RBP16.25■□□□□ 0.19
HMGN1-214ENST00000482733 EBNA1BP2Q99848 306 aaKnown RBP16.25■□□□□ 0.19
HMGN1-214ENST00000482733 NRSN2Q9GZP1 204 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 RAB17Q9H0T7 212 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 WHRNQ9P202 907 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 SNX24Q9Y343 169 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 UTP11Q9Y3A2 253 aaKnown RBP16.25■□□□□ 0.19
HMGN1-214ENST00000482733 FAM169AQ9Y6X4 670 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 MYLKQ15746 1914 aa16.25■□□□□ 0.19
HMGN1-214ENST00000482733 ZCWPW2A0A1B0GU75 182 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 DUX1O43812 170 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 MTHFD1P11586 935 aaKnown RBP16.24■□□□□ 0.19
HMGN1-214ENST00000482733 RPS3P23396 243 aaKnown RBP eCLIP16.24■□□□□ 0.191e-8■□□□□ 8.7
HMGN1-214ENST00000482733 CD1CP29017 333 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 RPL21P46778 160 aaKnown RBP16.24■□□□□ 0.19
HMGN1-214ENST00000482733 CD151P48509 253 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 INHBCP55103 352 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 HIF1AQ16665 826 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 LONRF1Q17RB8 773 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 BBS9Q3SYG4 887 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 ZNF658BQ4V348 819 aaPredicted RBP16.24■□□□□ 0.19
HMGN1-214ENST00000482733 CAPRIN2Q6IMN6 1127 aaKnown RBP16.24■□□□□ 0.19
HMGN1-214ENST00000482733 UNQ6494/PRO21346Q6UXR6 183 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 LDB1Q86U70 411 aaPredicted RBP16.24■□□□□ 0.19
HMGN1-214ENST00000482733 MARCH9Q86YJ5 346 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 AGGF1Q8N302 714 aaeCLIP16.24■□□□□ 0.19
HMGN1-214ENST00000482733 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.24■□□□□ 0.19
HMGN1-214ENST00000482733 MNS1Q8NEH6 495 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 GABPB2Q8TAK5 448 aaPredicted RBP16.24■□□□□ 0.19
HMGN1-214ENST00000482733 CALML6Q8TD86 181 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 ZFPM2Q8WW38 1151 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 NXPE2Q96DL1 559 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 CARD6Q9BX69 1037 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 TMEM121BQ9BXQ6 578 aaPredicted RBP16.24■□□□□ 0.19
HMGN1-214ENST00000482733 STRADBQ9C0K7 418 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 WWP1Q9H0M0 922 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 EPB41L5Q9HCM4 733 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 SLC40A1Q9NP59 571 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 FAM8A1Q9UBU6 413 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 GNPTGQ9UJJ9 305 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 PSMD13Q9UNM6 376 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 ENTPD2Q9Y5L3 495 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 HEBP2Q9Y5Z4 205 aa16.24■□□□□ 0.19
HMGN1-214ENST00000482733 PLXNB3Q9ULL4 1909 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 TMEM8BA6NDV4 472 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 TRABD2BA6NFA1 517 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 GOLGA8KD6RF30 607 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 GOLGA8TH3BQL2 631 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 IFRD1O00458 451 aaPredicted RBP16.23■□□□□ 0.19
HMGN1-214ENST00000482733 NDUFS1P28331 727 aa16.23■□□□□ 0.19
HMGN1-214ENST00000482733 CCKBRP32239 447 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms