RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 C8orf76Q96K31 380 aa6.28□□□□□ -1.4
CHD6-209ENST00000482596 BTN2A3PQ96KV6 586 aa6.28□□□□□ -1.4
CHD6-209ENST00000482596 SSBP4Q9BWG4 385 aaPredicted RBP6.28□□□□□ -1.4
CHD6-209ENST00000482596 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.28□□□□□ -1.4
CHD6-209ENST00000482596 TRIM7Q9C029 511 aa6.28□□□□□ -1.4
CHD6-209ENST00000482596 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.28□□□□□ -1.48e-7■□□□□ 9.4
CHD6-209ENST00000482596 AKTIPQ9H8T0 292 aa6.28□□□□□ -1.4
CHD6-209ENST00000482596 LRRC4Q9HBW1 653 aa6.28□□□□□ -1.4
CHD6-209ENST00000482596 TBC1D29Q9UFV1 150 aa6.28□□□□□ -1.4
CHD6-209ENST00000482596 VANGL2Q9ULK5 521 aa6.28□□□□□ -1.4
CHD6-209ENST00000482596 EXOC7Q9UPT5 735 aa6.28□□□□□ -1.4
CHD6-209ENST00000482596 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.28□□□□□ -1.4
CHD6-209ENST00000482596 PADI2Q9Y2J8 665 aa6.28□□□□□ -1.4
CHD6-209ENST00000482596 PCYT1BQ9Y5K3 369 aaPredicted RBP6.28□□□□□ -1.4
CHD6-209ENST00000482596 FREM1Q5H8C1 2179 aa6.28□□□□□ -1.4
CHD6-209ENST00000482596 RYR2Q92736 4967 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 DYTNA2CJ06 578 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 KCNU1A8MYU2 1149 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 EIF3DO15371 548 aaKnown RBP eCLIP6.27□□□□□ -1.41
CHD6-209ENST00000482596 TNFRSF21O75509 655 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 ZMPSTE24O75844 475 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 MTA2O94776 668 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 SOX30O94993 753 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 GCNT3O95395 438 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 APOEP02649 317 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 STATHP02808 62 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 RHOCP08134 193 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 KRT9P35527 623 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 FOLR3P41439 243 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 PITX1P78337 314 aaPredicted RBP6.27□□□□□ -1.41
CHD6-209ENST00000482596 ARF5P84085 180 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 CYP24A1Q07973 514 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 PMPCAQ10713 525 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 PEX6Q13608 980 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 PSMD6Q15008 389 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 KRTCAP3Q53RY4 240 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 ALFQ53S48 1182 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 ATXN7L2Q5T6C5 722 aaPredicted RBP6.27□□□□□ -1.41
CHD6-209ENST00000482596 PNCKQ6P2M8 343 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 DOK6Q6PKX4 331 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 ADAMTSL4Q6UY14 1074 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 SLC9B2Q86UD5 537 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 LIX1LQ8IVB5 337 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 PDILTQ8N807 584 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 C3orf56Q8N813 242 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 FBXO18Q8NFZ0 1043 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 PPP1R14CQ8TAE6 165 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 FAM222BQ8WU58 562 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 CPLX3Q8WVH0 158 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 CPT1BQ92523 772 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 SERPINB11Q96P15 392 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 OR2M4Q96R27 311 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 PIP5K1AQ99755 562 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 TRIM51Q9BSJ1 452 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 BEX2Q9BXY8 128 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 RAB34Q9BZG1 259 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 CEP44Q9C0F1 390 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 FOXP1Q9H334 677 aaPredicted RBP6.27□□□□□ -1.41
CHD6-209ENST00000482596 STN1Q9H668 368 aaKnown RBP6.27□□□□□ -1.41
CHD6-209ENST00000482596 MRPL44Q9H9J2 332 aaKnown RBP6.27□□□□□ -1.41
CHD6-209ENST00000482596 BLOC1S4Q9NUP1 217 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 CPNE7Q9UBL6 633 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 CNOT8Q9UFF9 292 aaKnown RBP6.27□□□□□ -1.41
CHD6-209ENST00000482596 DNAJC16Q9Y2G8 782 aa6.27□□□□□ -1.41
CHD6-209ENST00000482596 DSCAMO60469 2012 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 DNAJC13O75165 2243 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 BICDL2A1A5D9 508 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 C9J4A7 227 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 F8W735 103 aaPredicted RBP6.26□□□□□ -1.41
CHD6-209ENST00000482596 EREGO14944 169 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 ASNA1O43681 348 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 MATN4O95460 622 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 JCHAINP01591 159 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 IVLP07476 585 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 ACPPP15309 386 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 CREB1P16220 341 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 EPHA1P21709 976 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 CD68P34810 354 aaPredicted RBP6.26□□□□□ -1.41
CHD6-209ENST00000482596 MMP12P39900 470 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 CAPZBP47756 277 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 NUP107P57740 925 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 TUBB4BP68371 445 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 GUCY1B3Q02153 619 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 ELP6Q0PNE2 266 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 ORC2Q13416 577 aaPredicted RBP6.26□□□□□ -1.41
CHD6-209ENST00000482596 AUHQ13825 339 aaKnown RBP6.26□□□□□ -1.41
CHD6-209ENST00000482596 TUBB2AQ13885 445 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 SLC9A5Q14940 896 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 SNRNP35Q16560 246 aaKnown RBP6.26□□□□□ -1.41
CHD6-209ENST00000482596 FBLN7Q53RD9 439 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 SYPL2Q5VXT5 272 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 MARK2Q7KZI7 788 aaKnown RBP6.26□□□□□ -1.41
CHD6-209ENST00000482596 DRC7Q8IY82 874 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 SHISA5Q8N114 240 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 LGI4Q8N135 537 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 EID3Q8N140 333 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 SIX6OS1Q8N1H7 587 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 LRRC17Q8N6Y2 441 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 ANKRD52Q8NB46 1076 aa6.26□□□□□ -1.41
CHD6-209ENST00000482596 NETO2Q8NC67 525 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms