RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 RIMKLBQ9ULI2 386 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 CORO1CQ9ULV4 474 aaPredicted RBP7.69□□□□□ -1.18
SNX13-208ENST00000482558 NEU3Q9UQ49 428 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 STK38LQ9Y2H1 464 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 TCAF1Q9Y4C2 921 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 MYO18AQ92614 2054 aaKnown RBP7.68□□□□□ -1.18
SNX13-208ENST00000482558 A0A088AWK7 358 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 C2orf71A6NGG8 1288 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 CAPN14A8MX76 684 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 FAM47E-STBD1D6RA91 191 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 I6L893 689 aaPredicted RBP7.68□□□□□ -1.18
SNX13-208ENST00000482558 NPC1O15118 1278 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 DOK2O60496 412 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 CIB2O75838 187 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 PIAS1O75925 651 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 DDHD2O94830 711 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 LUC7L3O95232 432 aaKnown RBP7.68□□□□□ -1.18
SNX13-208ENST00000482558 HSPA4LO95757 839 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 PENKP01210 267 aaPredicted RBP7.68□□□□□ -1.18
SNX13-208ENST00000482558 HPXP02790 462 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 THBDP07204 575 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 GSTM1P09488 218 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 FGF3P11487 239 aaPredicted RBP7.68□□□□□ -1.18
SNX13-208ENST00000482558 MC4RP32245 332 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 GCKP35557 465 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 PBX3P40426 434 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 PPP3CCP48454 512 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 TUFMP49411 452 aaKnown RBP7.68□□□□□ -1.18
SNX13-208ENST00000482558 RAP1GDS1P52306 607 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 SLC12A2P55011 1212 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 NAA20P61599 178 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 VAMP2P63027 116 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 CRADDP78560 199 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 IL10RBQ08334 325 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 SF3A3Q12874 501 aaKnown RBP eCLIP7.68□□□□□ -1.18
SNX13-208ENST00000482558 SCARB2Q14108 478 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 PCLAFQ15004 111 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 PAN2Q504Q3 1202 aaKnown RBP7.68□□□□□ -1.18
SNX13-208ENST00000482558 HSP90AA5PQ58FG0 334 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 CMPK2Q5EBM0 449 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 CFAP157Q5JU67 520 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 MARC1Q5VT66 337 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 KLC3Q6P597 504 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 KLHDC10Q6PID8 442 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 RANBP10Q6VN20 620 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 LRRC8DQ7L1W4 858 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 SETD3Q86TU7 594 aaPredicted RBP7.68□□□□□ -1.18
SNX13-208ENST00000482558 ANKRD13BQ86YJ7 626 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 KIF2BQ8N4N8 673 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 TEX26Q8N6G2 289 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 OR6Y1Q8NGX8 325 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 SCAMP5Q8TAC9 235 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 CASP10Q92851 521 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 FBXO32Q969P5 355 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 FAR2Q96K12 515 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 DDX50Q9BQ39 737 aaKnown RBP7.68□□□□□ -1.18
SNX13-208ENST00000482558 ARHGAP39Q9C0H5 1083 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 SLC39A8Q9C0K1 460 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 ILKAPQ9H0C8 392 aaPredicted RBP7.68□□□□□ -1.18
SNX13-208ENST00000482558 IPPKQ9H8X2 491 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 RNPEPL1Q9HAU8 725 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 SP110Q9HB58 689 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 KRT84Q9NSB2 600 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 NDE1Q9NXR1 346 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 HACD3Q9P035 362 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 KIF17Q9P2E2 1029 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 DNAJB4Q9UDY4 337 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 TBC1D29Q9UFV1 150 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 EMCNQ9ULC0 261 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 ACOT9Q9Y305 439 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 HS3ST4Q9Y661 456 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 NLRC5Q86WI3 1866 aa7.68□□□□□ -1.18
SNX13-208ENST00000482558 PLXNA3P51805 1871 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 A0A1W2PPC4 97 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 A0A1W2PQ45 241 aaPredicted RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 A0A1W2PQY0 241 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 SLC7A4O43246 635 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 CBX6O95503 412 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 GSRP00390 522 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 IGLV3-27P01718 113 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 C2P06681 752 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 RBP1P09455 135 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 HNRNPLP14866 589 aaKnown RBP eCLIP7.67□□□□□ -1.18
SNX13-208ENST00000482558 STMN1P16949 149 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 HLA-DPA1P20036 260 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 CD151P48509 253 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 SERPINH1P50454 418 aaKnown RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 CSRP3P50461 194 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 CLCN5P51795 746 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 DNAJB13P59910 316 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 RAB10P61026 200 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 ARF3P61204 181 aaPredicted RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 IRX1P78414 480 aaPredicted RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 ARF1P84077 181 aaKnown RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 IRF9Q00978 393 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 PRKAA1Q13131 559 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 KCNAB2Q13303 367 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 EFR3AQ14156 821 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 USP10Q14694 798 aaKnown RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 RFTN1Q14699 578 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms