RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 FAM92BQ6ZTR7 304 aa13.17□□□□□ -0.3
CTDSP1-208ENST00000482272 TMEM139Q8IV31 216 aa13.17□□□□□ -0.3
CTDSP1-208ENST00000482272 UNC5BQ8IZJ1 945 aa13.17□□□□□ -0.3
CTDSP1-208ENST00000482272 OR4K2Q8NGD2 314 aa13.17□□□□□ -0.3
CTDSP1-208ENST00000482272 KLHL6Q8WZ60 621 aa13.17□□□□□ -0.3
CTDSP1-208ENST00000482272 UBXN4Q92575 508 aa13.17□□□□□ -0.3
CTDSP1-208ENST00000482272 RSC1A1Q92681 617 aa13.17□□□□□ -0.3
CTDSP1-208ENST00000482272 MRFAP1L1Q96HT8 127 aa13.17□□□□□ -0.3
CTDSP1-208ENST00000482272 PDE7BQ9NP56 450 aa13.17□□□□□ -0.3
CTDSP1-208ENST00000482272 TUBD1Q9UJT1 453 aa13.17□□□□□ -0.3
CTDSP1-208ENST00000482272 ACSL5Q9ULC5 683 aa13.17□□□□□ -0.3
CTDSP1-208ENST00000482272 PCDHB3Q9Y5E6 796 aa13.17□□□□□ -0.3
CTDSP1-208ENST00000482272 ARL5AQ9Y689 179 aa13.17□□□□□ -0.3
CTDSP1-208ENST00000482272 MAST4O15021 2626 aa13.17□□□□□ -0.3
CTDSP1-208ENST00000482272 BTNL10A8MVZ5 291 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 KCNN4O15554 427 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 SUV39H1O43463 412 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 KIF1CO43896 1103 aaKnown RBP13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 SRP72O76094 671 aaKnown RBP13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 WISP1O95388 367 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 MT-ND3P03897 115 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 PTMAP06454 111 aaKnown RBP13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 PYGMP11217 842 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 RALBP11234 206 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 FGF5P12034 268 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 PBLDP30039 288 aaPredicted RBP13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 PTPN7P35236 360 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 ADRA1AP35348 466 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 STAT5AP42229 794 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 POLE2P56282 527 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 SH3BP2P78314 561 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 MSLNQ13421 630 aaPredicted RBP13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 PLCL1Q15111 1095 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 CRTC2Q53ET0 693 aaPredicted RBP13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 C16orf46Q6P387 395 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 FAM83HQ6ZRV2 1179 aaPredicted RBP13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 BPHLQ86WA6 291 aaPredicted RBP13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 PPP1R3BQ86XI6 285 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 LRRC57Q8N9N7 239 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 OR2L2Q8NH16 312 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 ZFPM2Q8WW38 1151 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 STAMBPL1Q96FJ0 436 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 DCUN1D1Q96GG9 259 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 CLMPQ9H6B4 373 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 FEZ2Q9UHY8 353 aaPredicted RBP13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 KCTD3Q9Y597 815 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 RPS6KL1Q9Y6S9 549 aa13.16□□□□□ -0.3
CTDSP1-208ENST00000482272 AHCTF1Q8WYP5 2266 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 GRID2IPA4D2P6 1211 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 GOLGA6L9A6NEM1 432 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 PJA2O43164 708 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 SPAG6O75602 509 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 KIAA0754O94854 1291 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 PRKAR1AP10644 381 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 NELFEP18615 380 aaKnown RBP13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 PSMB4P28070 264 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 DLSTP36957 453 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 HADHAP40939 763 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 ARL4DP49703 201 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 NFKB2Q00653 900 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 CDC20Q12834 499 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 KCNAB2Q13303 367 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 GSE1Q14687 1217 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 ARMC6Q6NXE6 501 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 DET1Q7L5Y6 550 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 SIDT2Q8NBJ9 832 aaKnown RBP13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 GALNT6Q8NCL4 622 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 HEXDCQ8WVB3 486 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 STARD8Q92502 1023 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 ULK4Q96C45 1275 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 ELMO2Q96JJ3 720 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 SPATA13Q96N96 652 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 FCRL4Q96PJ5 515 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 INSM2Q96T92 566 aaPredicted RBP13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 C19orf43Q9BQ61 176 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 APOL2Q9BQE5 337 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 IMP3Q9NV31 184 aaKnown RBP13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 HRASLS2Q9NWW9 162 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 IL17BQ9UHF5 180 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 FKBPLQ9UIM3 349 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 CRLS1Q9UJA2 301 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 KCND3Q9UK17 655 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 AMFRQ9UKV5 643 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 RARRES3Q9UL19 164 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 PADI1Q9ULC6 663 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 COLEC10Q9Y6Z7 277 aa13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 SPENQ96T58 3664 aaKnown RBP13.15□□□□□ -0.3
CTDSP1-208ENST00000482272 TENM4Q6N022 2769 aa13.15□□□□□ -0.31
CTDSP1-208ENST00000482272 COL6A6A6NMZ7 2263 aa13.14□□□□□ -0.31
CTDSP1-208ENST00000482272 UBA6A0AVT1 1052 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-208ENST00000482272 GOLGA6L3A6NEY3 463 aa13.14□□□□□ -0.31
CTDSP1-208ENST00000482272 CFAP99D6REC4 459 aa13.14□□□□□ -0.31
CTDSP1-208ENST00000482272 PYCARD-AS1I3L0S3 204 aa13.14□□□□□ -0.31
CTDSP1-208ENST00000482272 MTHFD1P11586 935 aaKnown RBP13.14□□□□□ -0.31
CTDSP1-208ENST00000482272 ZNF28P17035 718 aa13.14□□□□□ -0.31
CTDSP1-208ENST00000482272 CSRP3P50461 194 aa13.14□□□□□ -0.31
CTDSP1-208ENST00000482272 VAV2P52735 878 aa13.14□□□□□ -0.31
CTDSP1-208ENST00000482272 PPP1CAP62136 330 aa13.14□□□□□ -0.31
CTDSP1-208ENST00000482272 ACY1Q03154 408 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms