RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 RPE65Q16518 533 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 FAM182AQ5T1J6 154 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 CACHD1Q5VU97 1274 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 TMEM220Q6QAJ8 160 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 ATG14Q6ZNE5 492 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 TIPARPQ7Z3E1 657 aaKnown RBP11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 PPP1R3BQ86XI6 285 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 SYCE1Q8N0S2 351 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 STARD8Q92502 1023 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 SEC14L1Q92503 715 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 SLC41A2Q96JW4 573 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 GORASP1Q9BQQ3 440 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 FICDQ9BVA6 458 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 PDE7BQ9NP56 450 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 KCND3Q9UK17 655 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 WDR37Q9Y2I8 494 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 HEBP2Q9Y5Z4 205 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 ARL5AQ9Y689 179 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 LOC101059948A0A1B0GTJ6 334 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 C17orf113A0A1B0GUU1 675 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 TLCD2A6NGC4 264 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 OR2AG2A6NM03 316 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 H7C0S8 307 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 MATN2O00339 956 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 KCNN4O15554 427 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 UGT1A9O60656 530 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 AGTP01019 485 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 GSTM1P09488 218 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 UGT1A6P19224 532 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 ITGALP20701 1170 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 UGT1A1P22309 533 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 UGT1A4P22310 534 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 PSMB4P28070 264 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 LEPRP48357 1165 aaKnown RBP11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 PRLHRP49683 370 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 NAP1L1P55209 391 aaKnown RBP11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 CYP4F2P78329 520 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 GSTM4Q03013 218 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 ACY1Q03154 408 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 KCNAB2Q13303 367 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 NFE2L1Q14494 772 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 PLCL1Q15111 1095 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 P3H1Q32P28 736 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 GPR33Q49SQ1 333 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 FNBP1LQ5T0N5 605 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 IRGCQ6NXR0 463 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 DARS2Q6PI48 645 aaKnown RBP11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 C6orf15Q6UXA7 325 aaPredicted RBP11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 PRICKLE2Q7Z3G6 844 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 SNX20Q7Z614 316 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 OOSP2Q86WS3 158 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 UBL4BQ8N7F7 174 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 LRRC57Q8N9N7 239 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 OR4K2Q8NGD2 314 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 STAMBPL1Q96FJ0 436 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 DCUN1D1Q96GG9 259 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 OR6C1Q96RD1 312 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 CCM2Q9BSQ5 444 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 CLMPQ9H6B4 373 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 ASB8Q9H765 288 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 KIR3DX1Q9H7L2 352 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 VPS37BQ9H9H4 285 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 UGT1A7Q9HAW7 530 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 UGT1A10Q9HAW8 530 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 UGT1A8Q9HAW9 530 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 KCTD3Q9Y597 815 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 PCDHB3Q9Y5E6 796 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 PCDHGA6Q9Y5G7 932 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 RPS6KL1Q9Y6S9 549 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 COLEC10Q9Y6Z7 277 aa11.87□□□□□ -0.51
SQSTM1-207ENST00000481335 UBR5O95071 2799 aaPredicted RBP11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 RCCD1A6NED2 376 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 OR5K3A6NET4 321 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 C21orf140B9A014 251 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 F5H423 210 aaPredicted RBP11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 TERTO14746 1132 aaKnown RBP11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 GPR39O43194 453 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 SUV39H1O43463 412 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 WISP1O95388 367 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 SLC35G4P0C7Q5 338 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 TCN2P20062 427 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 SEPHS1P49903 392 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 CSRP3P50461 194 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 ZNF140P52738 457 aaPredicted RBP11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 XIAPP98170 497 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 MSLNQ13421 630 aaPredicted RBP11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 RASGRP3Q8IV61 690 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 NXPE1Q8N323 547 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 SIDT2Q8NBJ9 832 aaKnown RBP11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 GPR150Q8NGU9 434 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 OR8K5Q8NH50 307 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 HM13Q8TCT9 377 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 APOBEC4Q8WW27 367 aaKnown RBP11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 COPS8Q99627 209 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 TBL1YQ9BQ87 522 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 IMP3Q9NV31 184 aaKnown RBP11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 TRIM10Q9UDY6 481 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 FKBPLQ9UIM3 349 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 CRLS1Q9UJA2 301 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 AMFRQ9UKV5 643 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms