RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 PTCD2Q8WV60 388 aaKnown RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 ROPN1LQ96C74 230 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 KCTD14Q9BQ13 255 aaPredicted RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 MRPL57Q9BQC6 102 aaKnown RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 PIGVQ9NUD9 493 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 EXD2Q9NVH0 621 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 NDUFAF1Q9Y375 327 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 TIMM13Q9Y5L4 95 aaPredicted RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 ANKRD34BA5PLL1 514 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 MASP2O00187 686 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 SLITRK5O94991 958 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 LEPRP48357 1165 aaKnown RBP10.02□□□□□ -0.81
COMMD4-203ENST00000480484 KCNC1P48547 511 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 AFF1P51825 1210 aaKnown RBP10.02□□□□□ -0.81
COMMD4-203ENST00000480484 LIMK1P53667 647 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 BCAT1P54687 386 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 ADARB1P78563 741 aaKnown RBP10.02□□□□□ -0.81
COMMD4-203ENST00000480484 TUBA3CQ13748 450 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 PYCR3Q53H96 274 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 RBM20Q5T481 1227 aaKnown RBP10.02□□□□□ -0.81
COMMD4-203ENST00000480484 C9orf57Q5W0N0 161 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 PSD4Q8NDX1 1056 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 DNAJB3Q8WWF6 145 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 MAGED4Q96JG8 741 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 FAR2Q96K12 515 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 CNDP2Q96KP4 475 aaKnown RBP10.02□□□□□ -0.81
COMMD4-203ENST00000480484 GPR78Q96P69 363 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 YTHDF1Q9BYJ9 559 aaKnown RBP10.02□□□□□ -0.81
COMMD4-203ENST00000480484 TP63Q9H3D4 680 aaPredicted RBP10.02□□□□□ -0.81
COMMD4-203ENST00000480484 MARCH7Q9H992 704 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 GDAP2Q9NXN4 497 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 NKIRAS2Q9NYR9 191 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 NUDT5Q9UKK9 219 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 H3BMM5 538 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 EEF2KO00418 725 aaKnown RBP10.02□□□□□ -0.81
COMMD4-203ENST00000480484 DLGAP3O95886 979 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 BMP4P12644 408 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 SLC6A2P23975 617 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 TM4SF4P48230 202 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 ECT2LQ008S8 904 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 ADIGQ0VDE8 80 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 BNIP2Q12982 314 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 ACAP2Q15057 778 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 ZBTB6Q15916 424 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 DUSP28Q4G0W2 176 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 LCN8Q6JVE9 175 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 UGT3A1Q6NUS8 523 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 TAS2R42Q7RTR8 314 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 LINC00523Q86TU6 105 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 SCML4Q8N228 414 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 NDNFQ8TB73 568 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 VPS33AQ96AX1 596 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 SLC30A3Q99726 388 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 CHID1Q9BWS9 393 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 MIR1-1HGQ9H1L0 117 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 AKTIPQ9H8T0 292 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 PARVBQ9HBI1 364 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 AKIP1Q9NQ31 210 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 PRDM8Q9NQV8 689 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 INTS10Q9NVR2 710 aaKnown RBP10.02□□□□□ -0.81
COMMD4-203ENST00000480484 CPA4Q9UI42 421 aa10.02□□□□□ -0.81
COMMD4-203ENST00000480484 ZFC3H1O60293 1989 aaKnown RBP10.02□□□□□ -0.81
COMMD4-203ENST00000480484 A8MT66 165 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 CYP17A1P05093 508 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 GPIP06744 558 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 SMIM10L2AP0DMW4 78 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 SMIM10L2BP0DMW5 78 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 CRHBPP24387 322 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 GIPRP48546 466 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 GSK3BP49841 420 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 ARPC4P59998 168 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 NFYCQ13952 458 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 NDUFA5Q16718 116 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 SMUG1Q53HV7 270 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 SLC27A1Q6PCB7 646 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 KIAA0408Q6ZU52 694 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 USP51Q70EK9 711 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 USP50Q70EL3 339 aaPredicted RBP10.01□□□□□ -0.81
COMMD4-203ENST00000480484 GPRIN1Q7Z2K8 1008 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 THAP5Q7Z6K1 395 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 C8orf59Q8N0T1 100 aaPredicted RBP10.01□□□□□ -0.81
COMMD4-203ENST00000480484 DCBLD1Q8N8Z6 715 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 ARRDC4Q8NCT1 418 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 LRRC58Q96CX6 371 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 HDAC11Q96DB2 347 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 C19orf60Q96EN9 201 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 FUBP3Q96I24 572 aaKnown RBP eCLIP10.01□□□□□ -0.81
COMMD4-203ENST00000480484 RHOVQ96L33 236 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 DACH2Q96NX9 599 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 ASB2Q96Q27 587 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 HOPXQ9BPY8 73 aaPredicted RBP10.01□□□□□ -0.81
COMMD4-203ENST00000480484 LMAN2LQ9H0V9 348 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 PIN4Q9Y237 131 aaKnown RBP10.01□□□□□ -0.81
COMMD4-203ENST00000480484 IFT52Q9Y366 437 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 PCDHGA3Q9Y5H0 932 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 COL1A2P08123 1366 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 C16orf96A6NNT2 1141 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 AGRPO00253 132 aa10.01□□□□□ -0.81
COMMD4-203ENST00000480484 IPO13O94829 963 aaKnown RBP10.01□□□□□ -0.81
COMMD4-203ENST00000480484 JUNBP17275 347 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms