RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 SLC13A1Q9BZW2 595 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 ABCG4Q9H172 646 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 CARS2Q9HA77 564 aaKnown RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 MRM3Q9HC36 420 aaKnown RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 TRIM39Q9HCM9 518 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 FAM114A2Q9NRY5 505 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 THSD1Q9NS62 852 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 MARCH4Q9P2E8 410 aaPredicted RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 ATXN10Q9UBB4 475 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 ZC3H7BQ9UGR2 993 aaKnown RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 APOBEC3BQ9UH17 382 aaKnown RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 ZNHIT2Q9UHR6 403 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 RIMKLBQ9ULI2 386 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 SUFUQ9UMX1 484 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 SLC17A4Q9Y2C5 497 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 PLEKHM1Q9Y4G2 1056 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 PCDHGA8Q9Y5G5 932 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 PCYT1BQ9Y5K3 369 aaPredicted RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 SPENQ96T58 3664 aaKnown RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 OR2AG2A6NM03 316 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 B8ZZF3 427 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 BHMG1C9JSJ3 638 aaPredicted RBP8.92□□□□□ -0.98
VCP-206ENST00000480327 LMO7DNF2Z398 122 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 H3BM21 787 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 CD3EAPO15446 510 aaKnown RBP8.92□□□□□ -0.98
VCP-206ENST00000480327 NOBOXO60393 691 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 DNAJC6O75061 913 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 CDK14O94921 469 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 SLU7O95391 586 aaKnown RBP8.92□□□□□ -0.98
VCP-206ENST00000480327 POLBP06746 335 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 CTSEP14091 401 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 PGAM1P18669 254 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 PAMP19021 973 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 MSH3P20585 1137 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 PSMA3P25788 255 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 ARNTP27540 789 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 FOXN2P32314 431 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 CARSP49589 748 aaKnown RBP8.92□□□□□ -0.98
VCP-206ENST00000480327 HK3P52790 923 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 DRG2P55039 364 aaKnown RBP8.92□□□□□ -0.98
VCP-206ENST00000480327 CAV1Q03135 178 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 TMEM115Q12893 351 aaPredicted RBP8.92□□□□□ -0.98
VCP-206ENST00000480327 GTF2H3Q13889 308 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 NR0B2Q15466 257 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 DBN1Q16643 649 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 PRRT3Q5FWE3 981 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 LDLRAP1Q5SW96 308 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 BROXQ5VW32 411 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 UNC5AQ6ZN44 842 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 RBM44Q6ZP01 1051 aaKnown RBP8.92□□□□□ -0.98
VCP-206ENST00000480327 CHST15Q7LFX5 561 aaPredicted RBP8.92□□□□□ -0.98
VCP-206ENST00000480327 TMEM135Q86UB9 458 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 GALNT13Q8IUC8 556 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 SFTPA2Q8IWL1 248 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 NXPE1Q8N323 547 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 RASGEF1AQ8N9B8 481 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 EXD3Q8N9H8 876 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.92□□□□□ -0.98
VCP-206ENST00000480327 CCL4L1Q8NHW4 92 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 DTX3LQ8TDB6 740 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 SEC14L1Q92503 715 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 PEX13Q92968 403 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 ULK4Q96C45 1275 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 SGF29Q96ES7 293 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 DCUN1D1Q96GG9 259 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 CCDC3Q9BQI4 270 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 TMEM168Q9H0V1 697 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 CATSPERZQ9NTU4 200 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 C20orf96Q9NUD7 363 aaPredicted RBP8.92□□□□□ -0.98
VCP-206ENST00000480327 ZDHHC18Q9NUE0 388 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.92□□□□□ -0.98
VCP-206ENST00000480327 TEX264Q9Y6I9 313 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 V9GYY5 206 aaPredicted RBP8.92□□□□□ -0.98
VCP-206ENST00000480327 RELNP78509 3460 aa8.92□□□□□ -0.98
VCP-206ENST00000480327 TRBV5-4A0A0C4DH59 114 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 ZCWPW2A0A1B0GU75 182 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 A0A1W2PQM1 296 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 E7ESA3 106 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 TNFRSF10CO14798 259 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 GRID2O43424 1007 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 VEGFDO43915 354 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 NUAK1O60285 661 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 OR1I1O60431 355 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 TCEA3O75764 348 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 USP1O94782 785 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 TNFSF15O95150 251 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 IVLP07476 585 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 ERVK-10P10266 1014 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 ACP5P13686 325 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 HGFP14210 728 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 ACRV1P26436 265 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 AK4P27144 223 aaPredicted RBP8.91□□□□□ -0.98
VCP-206ENST00000480327 RBMS1P29558 406 aaKnown RBP8.91□□□□□ -0.98
VCP-206ENST00000480327 PBLDP30039 288 aaPredicted RBP8.91□□□□□ -0.98
VCP-206ENST00000480327 ARCN1P48444 511 aaKnown RBP8.91□□□□□ -0.98
VCP-206ENST00000480327 BLKP51451 505 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 CTSCP53634 463 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 B4GALNT1Q00973 533 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 THOC5Q13769 683 aaKnown RBP8.91□□□□□ -0.98
VCP-206ENST00000480327 CRYMQ14894 314 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms