RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 UNC5BQ8IZJ1 945 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 SFRP1Q8N474 314 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 NAT14Q8WUY8 206 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 TSSK1BQ9BXA7 367 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 MOCS1Q9NZB8 636 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 PADI4Q9UM07 663 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 GOLGA4Q13439 2230 aaKnown RBP19.37■□□□□ 0.69
LIME1-205ENST00000480139 SPAARA0A1B0GVQ0 90 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 H3BMM5 538 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 NUDT21O43809 227 aaKnown RBP19.37■□□□□ 0.69
LIME1-205ENST00000480139 ESR1P03372 595 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 ERVK-10P10266 1014 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 PNLIPP16233 465 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 PBLDP30039 288 aaPredicted RBP19.37■□□□□ 0.69
LIME1-205ENST00000480139 ECHS1P30084 290 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 FASLGP48023 281 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 RPA4Q13156 261 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 DNAJC3Q13217 504 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 NFE2L1Q14494 772 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 SMAD1Q15797 465 aaKnown RBP19.37■□□□□ 0.69
LIME1-205ENST00000480139 FAM83HQ6ZRV2 1179 aaPredicted RBP19.37■□□□□ 0.69
LIME1-205ENST00000480139 CYS1Q717R9 158 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 RELL1Q8IUW5 271 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 DENND6AQ8IWF6 608 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 AVL9Q8NBF6 648 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 C2CD4AQ8NCU7 369 aaPredicted RBP19.37■□□□□ 0.69
LIME1-205ENST00000480139 IFT81Q8WYA0 676 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 BIRC8Q96P09 236 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 PRDM8Q9NQV8 689 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 IARS2Q9NSE4 1012 aaKnown RBP19.37■□□□□ 0.69
LIME1-205ENST00000480139 FBXO5Q9UKT4 447 aa19.37■□□□□ 0.69
LIME1-205ENST00000480139 APOBEC2Q9Y235 224 aaKnown RBP19.37■□□□□ 0.69
LIME1-205ENST00000480139 UBA6A0AVT1 1052 aaPredicted RBP19.36■□□□□ 0.69
LIME1-205ENST00000480139 LIN7AO14910 233 aaPredicted RBP19.36■□□□□ 0.69
LIME1-205ENST00000480139 SNX2O60749 519 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 RHOXF2BP0C7M4 288 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 FTH1P19P0C7X4 201 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 GLB1P16278 677 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 MAGEA4P43358 317 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 LEPRP48357 1165 aaKnown RBP19.36■□□□□ 0.69
LIME1-205ENST00000480139 PLOD1Q02809 727 aaPredicted RBP19.36■□□□□ 0.69
LIME1-205ENST00000480139 CTBP1Q13363 440 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 PPM1JQ5JR12 505 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 TRMT10BQ6PF06 316 aaKnown RBP19.36■□□□□ 0.69
LIME1-205ENST00000480139 ZNF438Q7Z4V0 828 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 CCDC25Q86WR0 208 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 SFTPA2Q8IWL1 248 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 PALM2Q8IXS6 379 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 ARL14Q8N4G2 192 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 MAPK15Q8TD08 544 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 PANX3Q96QZ0 392 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 FMO2Q99518 471 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 RHOXF2Q9BQY4 288 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 COG4Q9H9E3 785 aa19.36■□□□□ 0.69
LIME1-205ENST00000480139 DCHS1Q96JQ0 3298 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 PDZK1P1A8MUH7 402 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 SPAG6O75602 509 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 RFPL3O75679 317 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 BRAFP15056 766 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 XRCC1P18887 633 aaPredicted RBP19.35■□□□□ 0.69
LIME1-205ENST00000480139 HALP42357 657 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 CARSP49589 748 aaKnown RBP19.35■□□□□ 0.69
LIME1-205ENST00000480139 EIF3BP55884 814 aaKnown RBP19.35■□□□□ 0.69
LIME1-205ENST00000480139 MGAT5Q09328 741 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 NR1D2Q14995 579 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 CTSL3PQ5NE16 218 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 TEDDM1Q5T9Z0 273 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 PTRHD1Q6GMV3 140 aaKnown RBP19.35■□□□□ 0.69
LIME1-205ENST00000480139 GUSBP11Q6P575 273 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 CFAP206Q8IYR0 622 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 EIF1ADQ8N9N8 165 aaKnown RBP19.35■□□□□ 0.69
LIME1-205ENST00000480139 IFI44Q8TCB0 444 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 SLC37A2Q8TED4 501 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 PATE1Q8WXA2 126 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 SARS2Q9NP81 518 aaKnown RBP19.35■□□□□ 0.69
LIME1-205ENST00000480139 PPANQ9NQ55 473 aaKnown RBP19.35■□□□□ 0.69
LIME1-205ENST00000480139 COMMD10Q9Y6G5 202 aa19.35■□□□□ 0.69
LIME1-205ENST00000480139 KPNA5O15131 536 aa19.34■□□□□ 0.69
LIME1-205ENST00000480139 SLU7O95391 586 aaKnown RBP19.34■□□□□ 0.69
LIME1-205ENST00000480139 MYF5P13349 255 aa19.34■□□□□ 0.69
LIME1-205ENST00000480139 RPL10P27635 214 aaKnown RBP19.34■□□□□ 0.69
LIME1-205ENST00000480139 MAZP56270 477 aaKnown RBP19.34■□□□□ 0.69
LIME1-205ENST00000480139 ZNF789Q5FWF6 425 aa19.34■□□□□ 0.69
LIME1-205ENST00000480139 TEX35Q5T0J7 233 aa19.34■□□□□ 0.69
LIME1-205ENST00000480139 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.34■□□□□ 0.69
LIME1-205ENST00000480139 EFL1Q7Z2Z2 1120 aaKnown RBP19.34■□□□□ 0.69
LIME1-205ENST00000480139 DGLUCYQ7Z3D6 616 aa19.34■□□□□ 0.69
LIME1-205ENST00000480139 SLC9B2Q86UD5 537 aa19.34■□□□□ 0.69
LIME1-205ENST00000480139 SLCO6A1Q86UG4 719 aa19.34■□□□□ 0.69
LIME1-205ENST00000480139 ELMO1Q92556 727 aa19.34■□□□□ 0.69
LIME1-205ENST00000480139 C9orf72Q96LT7 481 aa19.34■□□□□ 0.69
LIME1-205ENST00000480139 STN1Q9H668 368 aaKnown RBP19.34■□□□□ 0.69
LIME1-205ENST00000480139 FBXO6Q9NRD1 293 aaPredicted RBP19.34■□□□□ 0.69
LIME1-205ENST00000480139 POT1Q9NUX5 634 aa19.34■□□□□ 0.69
LIME1-205ENST00000480139 SCHIP1Q9P0W5 487 aaPredicted RBP19.34■□□□□ 0.69
LIME1-205ENST00000480139 ZFATQ9P243 1243 aa19.34■□□□□ 0.69
LIME1-205ENST00000480139 WDR37Q9Y2I8 494 aa19.34■□□□□ 0.69
LIME1-205ENST00000480139 CRYL1Q9Y2S2 319 aa19.34■□□□□ 0.69
LIME1-205ENST00000480139 SLC5A10A0PJK1 596 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 CPED1A4D0V7 1026 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms