RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 CCNYL3P0C7X3 344 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 CD36P16671 472 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 XRCC1P18887 633 aaPredicted RBP6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 OR2B6P58173 313 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 LSM3P62310 102 aaKnown RBP6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 SNAPC1Q16533 368 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 DUSP28Q4G0W2 176 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 BAIAP2L2Q6UXY1 529 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 ZNF567Q8N184 647 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 ZNF781Q8N8C0 355 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 SGCDQ92629 289 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 CEP295NLQ96MC4 621 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 PHOX2BQ99453 314 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 RAB11FIP5Q9BXF6 653 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 CEP41Q9BYV8 373 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 POLR2J2Q9GZM3 115 aaKnown RBP6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 RERGLQ9H628 205 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 STYXL1Q9Y6J8 313 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 MEGF6O75095 1541 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 SMIM28A0A1B0GU29 152 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 LCHNA4D1U4 455 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 FAM172BPA6NC97 362 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 EIF3FO00303 357 aaPredicted RBP6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 PTTG1O95997 202 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 CKMT2P17540 419 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 CHRNB2P17787 502 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 ARF4P18085 180 aaPredicted RBP6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 FGFR3P22607 806 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 MYBPC1Q00872 1141 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 EMX2Q04743 252 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 ORC1Q13415 861 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 XKR6Q5GH73 641 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 REP15Q6BDI9 236 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 LBX2Q6XYB7 198 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 QSOX2Q6ZRP7 698 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 ASRGL1Q7L266 308 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 SLC7A6OSQ96CW6 309 aaPredicted RBP6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 MFSD3Q96ES6 412 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 SPATA9Q9BWV2 254 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 CIPCQ9C0C6 399 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 SPON1Q9HCB6 807 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 FAIMQ9NVQ4 179 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 PCDH10Q9P2E7 1040 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 TELO2Q9Y4R8 837 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 TCRBV7S2A1N4TA0A589 114 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 E7ENX8 843 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 TEX28O15482 410 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 GRIA2P42262 883 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 DAOAP59103 153 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 PRR5P85299 388 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 CYP4F3Q08477 520 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 SEMA3AQ14563 771 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 MFSD10Q14728 455 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 AGMOQ6ZNB7 445 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 C11orf74Q86VG3 221 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 C1orf127Q8N9H9 656 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 ASCC1Q8N9N2 400 aaKnown RBP6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 OR8J3Q8NGG0 315 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 LRTOMTQ8WZ04 291 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 KLHL6Q8WZ60 621 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 UFD1Q92890 307 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 RFT1Q96AA3 541 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 RHBDF1Q96CC6 855 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 AP2M1Q96CW1 435 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 ZNF570Q96NI8 536 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 YME1L1Q96TA2 773 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 GTPBP2Q9BX10 602 aaKnown RBP6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 ITPAQ9BY32 194 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 ZFP14Q9HCL3 533 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 CHRAC1Q9NRG0 131 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 RIMKLBQ9ULI2 386 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 UNC13AQ9UPW8 1703 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 YDJCA8MPS7 323 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 K7EPI3 171 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 TBX1O43435 398 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 CHP2O43745 196 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 PEX14O75381 377 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 PSIP1O75475 530 aaKnown RBP6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 BMP2P12643 396 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 SPAM1P38567 509 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 ARFIP1P53367 373 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 ARSFP54793 590 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 CTBP2P56545 445 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 RGS8P57771 180 aaPredicted RBP6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 KCNJ11Q14654 390 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 TPRG1LQ5T0D9 272 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 FBXL19Q6PCT2 694 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 SHQ1Q6PI26 577 aaKnown RBP6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 USP30Q70CQ3 517 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 FBXO16Q8IX29 292 aaPredicted RBP6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 SUSD6Q92537 303 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 ZBED6CLQ96FA7 236 aaPredicted RBP6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 METTL2AQ96IZ6 378 aaKnown RBP6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 TSGA13Q96PP4 275 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 DSN1Q9H410 356 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 AGO3Q9H9G7 860 aaKnown RBP6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 ZBTB26Q9HCK0 441 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 XPNPEP1Q9NQW7 623 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 PLOD3O60568 738 aa6.07□□□□□ -1.44
PRPF4B-205ENST00000480058 KHDRBS3O75525 346 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms