RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 PRSS21Q9Y6M0 314 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 RNF215Q9Y6U7 377 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 ASXL3Q9C0F0 2248 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 KNTC1P50748 2209 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 TRBV23OR9-2A0A075B6M9 112 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 RHPN2P1A8MT19 583 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 LIN7AO14910 233 aaPredicted RBP10.62□□□□□ -0.71
ATG4B-219ENST00000479941 OPA1O60313 960 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 BRAFP15056 766 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 XRCC1P18887 633 aaPredicted RBP10.62□□□□□ -0.71
ATG4B-219ENST00000479941 PBLDP30039 288 aaPredicted RBP10.62□□□□□ -0.71
ATG4B-219ENST00000479941 GPR3P46089 330 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 ADARP55265 1226 aaKnown RBP10.62□□□□□ -0.71
ATG4B-219ENST00000479941 SLC7A5Q01650 507 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 PLOD1Q02809 727 aaPredicted RBP10.62□□□□□ -0.71
ATG4B-219ENST00000479941 GUCY2DQ02846 1103 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 FOXC1Q12948 553 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 RPA4Q13156 261 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 FRG1Q14331 258 aaKnown RBP10.62□□□□□ -0.71
ATG4B-219ENST00000479941 NR1D2Q14995 579 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 SMAD1Q15797 465 aaKnown RBP10.62□□□□□ -0.71
ATG4B-219ENST00000479941 SEPT7Q16181 437 aaKnown RBP10.62□□□□□ -0.71
ATG4B-219ENST00000479941 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.62□□□□□ -0.71
ATG4B-219ENST00000479941 ZNF470Q6ECI4 717 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 ZNF449Q6P9G9 518 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 DHRS13Q6UX07 377 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 UNC5AQ6ZN44 842 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 FAM83HQ6ZRV2 1179 aaPredicted RBP10.62□□□□□ -0.71
ATG4B-219ENST00000479941 ZNF438Q7Z4V0 828 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 KCNMB4Q86W47 210 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 TMPRSS12Q86WS5 348 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 IGDCC3Q8IVU1 814 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 RBM12BQ8IXT5 1001 aaKnown RBP10.62□□□□□ -0.71
ATG4B-219ENST00000479941 ZBED8Q8IZ13 594 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 GALNT15Q8N3T1 639 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 FBXO36Q8NEA4 188 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 FBXO25Q8TCJ0 367 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 FAM167BQ9BTA0 163 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 CARD6Q9BX69 1037 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.62□□□□□ -0.71
ATG4B-219ENST00000479941 FAM129AQ9BZQ8 928 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 FOXP3Q9BZS1 431 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 P2RY12Q9H244 342 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 COG4Q9H9E3 785 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 L2HGDHQ9H9P8 463 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 FAM114A2Q9NRY5 505 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 POT1Q9NUX5 634 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 INTS10Q9NVR2 710 aaKnown RBP10.62□□□□□ -0.71
ATG4B-219ENST00000479941 SCHIP1Q9P0W5 487 aaPredicted RBP10.62□□□□□ -0.71
ATG4B-219ENST00000479941 GNPTGQ9UJJ9 305 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 CHMP2BQ9UQN3 213 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 PCDHB1Q9Y5F3 818 aa10.62□□□□□ -0.71
ATG4B-219ENST00000479941 ASPMQ8IZT6 3477 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 RP1P56715 2156 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 UBA6A0AVT1 1052 aaPredicted RBP10.61□□□□□ -0.71
ATG4B-219ENST00000479941 ESYT3A0FGR9 886 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 ESPNB1AK53 854 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 BHMG1C9JSJ3 638 aaPredicted RBP10.61□□□□□ -0.71
ATG4B-219ENST00000479941 H3BMM5 538 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 PPM1DO15297 605 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 TCEA3O75764 348 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 VIPP01282 170 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 ESR1P03372 595 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 SLC35G4P0C7Q5 338 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 SLC19A1P41440 591 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 UBE2IP63279 158 aaKnown RBP10.61□□□□□ -0.71
ATG4B-219ENST00000479941 INSM1Q01101 510 aaPredicted RBP10.61□□□□□ -0.71
ATG4B-219ENST00000479941 FOXK2Q01167 660 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 HHEXQ03014 270 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 TRADDQ15628 312 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 ZNF658BQ4V348 819 aaPredicted RBP10.61□□□□□ -0.71
ATG4B-219ENST00000479941 HSP90AA5PQ58FG0 334 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 DNTTIP2Q5QJE6 756 aaKnown RBP10.61□□□□□ -0.71
ATG4B-219ENST00000479941 HP1BP3Q5SSJ5 553 aaPredicted RBP10.61□□□□□ -0.71
ATG4B-219ENST00000479941 STEAP4Q687X5 459 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 PTRHD1Q6GMV3 140 aaKnown RBP10.61□□□□□ -0.71
ATG4B-219ENST00000479941 ZDHHC24Q6UX98 284 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 TMPRSS7Q7RTY8 843 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 ANKMY2Q8IV38 441 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 TRIM48Q8IWZ4 208 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 CACTIN-AS1Q8N1I8 211 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 CHCHD4Q8N4Q1 142 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 PYROXD1Q8WU10 500 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 ELMO1Q92556 727 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 LPGAT1Q92604 370 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 CXorf40BQ96DE9 158 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 CERS2Q96G23 380 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 PANX3Q96QZ0 392 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 SLC38A3Q99624 504 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 WDR83Q9BRX9 315 aaKnown RBP10.61□□□□□ -0.71
ATG4B-219ENST00000479941 EPB41L5Q9HCM4 733 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 IARS2Q9NSE4 1012 aaKnown RBP10.61□□□□□ -0.71
ATG4B-219ENST00000479941 IL1RAPL1Q9NZN1 696 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 CPNE7Q9UBL6 633 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 FAM8A1Q9UBU6 413 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 DMGDHQ9UI17 866 aaKnown RBP10.61□□□□□ -0.71
ATG4B-219ENST00000479941 RABGEF1Q9UJ41 708 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 PSMD13Q9UNM6 376 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 WDR37Q9Y2I8 494 aa10.61□□□□□ -0.71
ATG4B-219ENST00000479941 PIKFYVEQ9Y2I7 2098 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms