RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 NEK11Q8NG66 645 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 LRRN4Q8WUT4 740 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 ZFYVE1Q9HBF4 777 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 TMPRSS11EQ9UL52 423 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 PSMD13Q9UNM6 376 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 SHOC2Q9UQ13 582 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 BTRCQ9Y297 605 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 MATN3O15232 486 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 MMP2P08253 660 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 VCLP18206 1134 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 PCK1P35558 622 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 CD86P42081 329 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 GALNT2Q10471 571 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 ZNF789Q5FWF6 425 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 DCAF10Q5QP82 559 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 PDPK2PQ6A1A2 396 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 FAM83HQ6ZRV2 1179 aaPredicted RBP16.89■□□□□ 0.29
HMGN1-212ENST00000479586 FJX1Q86VR8 437 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 LRRC49Q8IUZ0 686 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 CLEC1AQ8NC01 280 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 OR1L3Q8NH93 324 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 TM9SF4Q92544 642 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 SYT11Q9BT88 431 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 ACTR5Q9H9F9 607 aaPredicted RBP16.89■□□□□ 0.29
HMGN1-212ENST00000479586 NFKBIL1Q9UBC1 381 aaPredicted RBP16.89■□□□□ 0.29
HMGN1-212ENST00000479586 COPG2Q9UBF2 871 aa16.89■□□□□ 0.29
HMGN1-212ENST00000479586 CFAP20Q9Y6A4 193 aaKnown RBP16.89■□□□□ 0.29
HMGN1-212ENST00000479586 OR6C74A6NCV1 312 aa16.88■□□□□ 0.29
HMGN1-212ENST00000479586 TMEM150CB9EJG8 249 aa16.88■□□□□ 0.29
HMGN1-212ENST00000479586 MMRN1Q13201 1228 aa16.88■□□□□ 0.29
HMGN1-212ENST00000479586 BOLA3Q53S33 107 aa16.88■□□□□ 0.29
HMGN1-212ENST00000479586 DUS1LQ6P1R4 473 aaKnown RBP16.88■□□□□ 0.29
HMGN1-212ENST00000479586 GDF7Q7Z4P5 450 aa16.88■□□□□ 0.29
HMGN1-212ENST00000479586 OOSP2Q86WS3 158 aa16.88■□□□□ 0.29
HMGN1-212ENST00000479586 GRHL3Q8TE85 626 aa16.88■□□□□ 0.29
HMGN1-212ENST00000479586 FER1L6-AS2Q96M78 137 aa16.88■□□□□ 0.29
HMGN1-212ENST00000479586 FANCEQ9HB96 536 aa16.88■□□□□ 0.29
HMGN1-212ENST00000479586 IMP3Q9NV31 184 aaKnown RBP16.88■□□□□ 0.29
HMGN1-212ENST00000479586 NOVA2Q9UNW9 492 aaKnown RBP16.88■□□□□ 0.29
HMGN1-212ENST00000479586 PADI2Q9Y2J8 665 aa16.88■□□□□ 0.29
HMGN1-212ENST00000479586 FER1L5A0AVI2 2057 aa16.88■□□□□ 0.29
HMGN1-212ENST00000479586 CCDC88CQ9P219 2028 aa16.87■□□□□ 0.29
HMGN1-212ENST00000479586 CNTRLQ7Z7A1 2325 aa16.87■□□□□ 0.29
HMGN1-212ENST00000479586 C9J4A7 227 aa16.87■□□□□ 0.29
HMGN1-212ENST00000479586 LDB2O43679 373 aa16.87■□□□□ 0.29
HMGN1-212ENST00000479586 KLF7O75840 302 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-212ENST00000479586 IPO13O94829 963 aaKnown RBP16.87■□□□□ 0.29
HMGN1-212ENST00000479586 MTHFD1P11586 935 aaKnown RBP16.87■□□□□ 0.29
HMGN1-212ENST00000479586 BPIP17213 487 aa16.87■□□□□ 0.29
HMGN1-212ENST00000479586 CYP2A7P20853 494 aa16.87■□□□□ 0.29
HMGN1-212ENST00000479586 TMEM115Q12893 351 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-212ENST00000479586 CDKAL1Q5VV42 579 aa16.87■□□□□ 0.29
HMGN1-212ENST00000479586 TIGD7Q6NT04 549 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-212ENST00000479586 TMC3Q7Z5M5 1100 aa16.87■□□□□ 0.29
HMGN1-212ENST00000479586 WDR77Q9BQA1 342 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-212ENST00000479586 ADGRE3Q9BY15 652 aa16.87■□□□□ 0.29
HMGN1-212ENST00000479586 AMACRQ9UHK6 382 aa16.87■□□□□ 0.29
HMGN1-212ENST00000479586 ZNF711Q9Y462 761 aa16.87■□□□□ 0.29
HMGN1-212ENST00000479586 SLC9B1P1A6NJY1 282 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 SNRPB2P08579 225 aaKnown RBP16.86■□□□□ 0.29
HMGN1-212ENST00000479586 STSP08842 583 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 CD48P09326 243 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 EDN3P14138 238 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 NFE2L1Q14494 772 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 HIF1AQ16665 826 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 FAM182AQ5T1J6 154 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 ZNF385CQ66K41 422 aaPredicted RBP16.86■□□□□ 0.29
HMGN1-212ENST00000479586 NCBP2-AS2Q69YL0 99 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 ARMC6Q6NXE6 501 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 MYO7BQ6PIF6 2116 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 AMZ2Q86W34 360 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 CARFQ8N187 725 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 GDAP1Q8TB36 358 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 IP6K3Q96PC2 410 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 TRAPPC9Q96Q05 1148 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 RAD18Q9NS91 495 aa16.86■□□□□ 0.29
HMGN1-212ENST00000479586 PEX12O00623 359 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 POP7O75817 140 aaKnown RBP16.85■□□□□ 0.29
HMGN1-212ENST00000479586 TPM2P07951 284 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 ATXN8OSP0DMR3 200 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 FERP16591 822 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 CCNCP24863 283 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 PTGER4P35408 488 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 CTSCP53634 463 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 FOXL2P58012 376 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 DMPKQ09013 629 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 GTF2H3Q13889 308 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 BECN1Q14457 450 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 KRT81Q14533 505 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 SSPNQ14714 243 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 ATP13A5Q4VNC0 1218 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 CCDC122Q5T0U0 273 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 PPP1R2P3Q6NXS1 205 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 IRF2BP2Q7Z5L9 587 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 FAR1Q8WVX9 515 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 TEKT4Q8WW24 435 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 FATE1Q969F0 183 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 VPS35Q96QK1 796 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 TRIB3Q96RU7 358 aa16.85■□□□□ 0.29
HMGN1-212ENST00000479586 DHRS4Q9BTZ2 278 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms