RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 WDR37Q9Y2I8 494 aa6.17□□□□□ -1.42
SF3B1-209ENST00000479532 PCDHA9Q9Y5H5 950 aa6.17□□□□□ -1.42
SF3B1-209ENST00000479532 SNX11Q9Y5W9 270 aa6.17□□□□□ -1.42
SF3B1-209ENST00000479532 IGHV1OR15-9A0A0B4J2B8 117 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 TCRBV16S1A1N1A0A5B0 115 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 CTAGE15A4D2H0 777 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 PRR23AA6NEV1 266 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 CFAP73A6NFT4 308 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-209ENST00000479532 F5H423 210 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-209ENST00000479532 H0Y858 1186 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 TRAFD1O14545 582 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-209ENST00000479532 NDST3O95803 873 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 MT-CYBP00156 380 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-209ENST00000479532 EPOP01588 193 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 FGF1P05230 155 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 ELFN1P0C7U0 828 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 CTAGE8P0CG41 777 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 TDGF1P13385 188 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 ZNF30P17039 623 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 PAMP19021 973 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 TNFRSF8P28908 595 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 VIPR1P32241 457 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 DRD3P35462 400 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 IGFALSP35858 605 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 CCT5P48643 541 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 WNT3AP56704 352 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 RPS21P63220 83 aaKnown RBP6.16□□□□□ -1.42
SF3B1-209ENST00000479532 CDK16Q00536 496 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 PDE1BQ01064 536 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 DR1Q01658 176 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 GUCY1A3Q02108 690 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 EGR3Q06889 387 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 DMWDQ09019 674 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 NIPAL4Q0D2K0 466 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 TRAF2Q12933 501 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 GPS1Q13098 491 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 KCNAB2Q13303 367 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 SGCGQ13326 291 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 BLMHQ13867 455 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 SIM2Q14190 667 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-209ENST00000479532 TESK1Q15569 626 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 SETMARQ53H47 684 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-209ENST00000479532 SPDYCQ5MJ68 293 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 WDR45BQ5MNZ6 344 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 PIP5KL1Q5T9C9 394 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 AGBL4Q5VU57 503 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 KIAA0895LQ68EN5 471 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 CYB5D1Q6P9G0 228 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 C6orf89Q6UWU4 347 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 KDELC2Q7Z4H8 507 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 RABEPKQ7Z6M1 372 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 MTDHQ86UE4 582 aaKnown RBP6.16□□□□□ -1.42
SF3B1-209ENST00000479532 CTAGE6Q86UF2 777 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 JAMLQ86YT9 394 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 CTAGE4Q8IX94 777 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 DNAAF3Q8N9W5 541 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 ZBTB44Q8NCP5 570 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 BBOF1Q8ND07 529 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 SPATA4Q8NEY3 305 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 SPATA22Q8NHS9 363 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 RLN3Q8WXF3 142 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.16□□□□□ -1.42
SF3B1-209ENST00000479532 SNX19Q92543 992 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 DIO2Q92813 273 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 ATOH1Q92858 354 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-209ENST00000479532 ECHDC3Q96DC8 303 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 SPDL1Q96EA4 605 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 KRT12Q99456 494 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 TBL1YQ9BQ87 522 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 MLPHQ9BV36 600 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-209ENST00000479532 FICDQ9BVA6 458 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 GPR174Q9BXC1 333 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 RAB17Q9H0T7 212 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 SEMA4AQ9H3S1 761 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 TRABDQ9H4I3 376 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 KCTD5Q9NXV2 234 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 UTP6Q9NYH9 597 aaKnown RBP6.16□□□□□ -1.42
SF3B1-209ENST00000479532 WSB2Q9NYS7 404 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-209ENST00000479532 HACD3Q9P035 362 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 PCYOX1Q9UHG3 505 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 TMCO1Q9UM00 188 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 UTP11Q9Y3A2 253 aaKnown RBP6.16□□□□□ -1.42
SF3B1-209ENST00000479532 FADS3Q9Y5Q0 445 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 NPFFR2Q9Y5X5 522 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 CEP192Q8TEP8 1941 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 EML5Q05BV3 1969 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 VCANP13611 3396 aa6.16□□□□□ -1.42
SF3B1-209ENST00000479532 BDP1A6H8Y1 2624 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 A0A0J9YYE9 177 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 TMEM82A0PJX8 343 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 CAPN8A6NHC0 703 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 C2orf81A6NN90 581 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 ANKRD66B4E2M5 251 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 PSMD11O00231 422 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 PLK4O00444 970 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 E2F6O75461 281 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 GJB3O75712 270 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 TM7SF2O76062 418 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 METTL18O95568 372 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms