RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 TRIM16O95361 564 aa24.55■■□□□ 1.52
PERM1-203ENST00000479361 EML2O95834 649 aa24.55■■□□□ 1.52
PERM1-203ENST00000479361 HALP42357 657 aa24.55■■□□□ 1.52
PERM1-203ENST00000479361 MAZP56270 477 aaKnown RBP24.55■■□□□ 1.52
PERM1-203ENST00000479361 E2F1Q01094 437 aa24.55■■□□□ 1.52
PERM1-203ENST00000479361 SEPT7Q16181 437 aaKnown RBP24.55■■□□□ 1.52
PERM1-203ENST00000479361 HSP90AA5PQ58FG0 334 aa24.55■■□□□ 1.52
PERM1-203ENST00000479361 STEAP4Q687X5 459 aa24.55■■□□□ 1.52
PERM1-203ENST00000479361 PTRHD1Q6GMV3 140 aaKnown RBP24.55■■□□□ 1.52
PERM1-203ENST00000479361 ABRAXAS1Q6UWZ7 409 aa24.55■■□□□ 1.52
PERM1-203ENST00000479361 SFTPA2Q8IWL1 248 aa24.55■■□□□ 1.52
PERM1-203ENST00000479361 CFAP206Q8IYR0 622 aa24.55■■□□□ 1.52
PERM1-203ENST00000479361 ARL14Q8N4G2 192 aa24.55■■□□□ 1.52
PERM1-203ENST00000479361 PATE1Q8WXA2 126 aa24.55■■□□□ 1.52
PERM1-203ENST00000479361 CERS2Q96G23 380 aa24.55■■□□□ 1.52
PERM1-203ENST00000479361 LRIT1Q9P2V4 623 aa24.55■■□□□ 1.52
PERM1-203ENST00000479361 GOLGA4Q13439 2230 aaKnown RBP24.54■■□□□ 1.52
PERM1-203ENST00000479361 RHPN2P1A8MT19 583 aa24.54■■□□□ 1.52
PERM1-203ENST00000479361 BHMG1C9JSJ3 638 aaPredicted RBP24.54■■□□□ 1.52
PERM1-203ENST00000479361 PNLIPP16233 465 aa24.54■■□□□ 1.52
PERM1-203ENST00000479361 RPS3P23396 243 aaKnown RBP eCLIP24.54■■□□□ 1.52
PERM1-203ENST00000479361 RPL10P27635 214 aaKnown RBP24.54■■□□□ 1.52
PERM1-203ENST00000479361 ADARP55265 1226 aaKnown RBP24.54■■□□□ 1.52
PERM1-203ENST00000479361 FRG1Q14331 258 aaKnown RBP24.54■■□□□ 1.52
PERM1-203ENST00000479361 FASTKD3Q14CZ7 662 aaKnown RBP24.54■■□□□ 1.52
PERM1-203ENST00000479361 FAM83HQ6ZRV2 1179 aaPredicted RBP24.54■■□□□ 1.52
PERM1-203ENST00000479361 CEP128Q6ZU80 1094 aa24.54■■□□□ 1.52
PERM1-203ENST00000479361 SLC9B2Q86UD5 537 aa24.54■■□□□ 1.52
PERM1-203ENST00000479361 SLC37A2Q8TED4 501 aa24.54■■□□□ 1.52
PERM1-203ENST00000479361 PPANQ9NQ55 473 aaKnown RBP24.54■■□□□ 1.52
PERM1-203ENST00000479361 FAM8A1Q9UBU6 413 aa24.54■■□□□ 1.52
PERM1-203ENST00000479361 MTRF1LQ9UGC7 380 aaKnown RBP24.54■■□□□ 1.52
PERM1-203ENST00000479361 PCDHB1Q9Y5F3 818 aa24.54■■□□□ 1.52
PERM1-203ENST00000479361 ZFC3H1O60293 1989 aaKnown RBP24.53■■□□□ 1.52
PERM1-203ENST00000479361 H3BMM5 538 aa24.53■■□□□ 1.52
PERM1-203ENST00000479361 ZW10O43264 779 aa24.53■■□□□ 1.52
PERM1-203ENST00000479361 ERVK-10P10266 1014 aa24.53■■□□□ 1.52
PERM1-203ENST00000479361 FASLGP48023 281 aa24.53■■□□□ 1.52
PERM1-203ENST00000479361 N4BP2L1Q5TBK1 243 aaPredicted RBP24.53■■□□□ 1.52
PERM1-203ENST00000479361 ERMP1Q7Z2K6 904 aa24.53■■□□□ 1.52
PERM1-203ENST00000479361 CCDC25Q86WR0 208 aa24.53■■□□□ 1.52
PERM1-203ENST00000479361 PALM2Q8IXS6 379 aa24.53■■□□□ 1.52
PERM1-203ENST00000479361 LPGAT1Q92604 370 aa24.53■■□□□ 1.52
PERM1-203ENST00000479361 CCDC74AQ96AQ1 378 aa24.53■■□□□ 1.52
PERM1-203ENST00000479361 PANX3Q96QZ0 392 aa24.53■■□□□ 1.52
PERM1-203ENST00000479361 TSPYL1Q9H0U9 437 aa24.53■■□□□ 1.52
PERM1-203ENST00000479361 ABCG4Q9H172 646 aa24.53■■□□□ 1.52
PERM1-203ENST00000479361 P2RY12Q9H244 342 aa24.53■■□□□ 1.52
PERM1-203ENST00000479361 IARS2Q9NSE4 1012 aaKnown RBP24.53■■□□□ 1.52
PERM1-203ENST00000479361 ZDHHC18Q9NUE0 388 aa24.53■■□□□ 1.52
PERM1-203ENST00000479361 RNF215Q9Y6U7 377 aa24.53■■□□□ 1.52
PERM1-203ENST00000479361 ARHGEF17Q96PE2 2063 aaPredicted RBP24.53■■□□□ 1.52
PERM1-203ENST00000479361 TRBV23OR9-2A0A075B6M9 112 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 LIN7AO14910 233 aaPredicted RBP24.52■■□□□ 1.52
PERM1-203ENST00000479361 ESR1P03372 595 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 SLC35G4P0C7Q5 338 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 SLC1A2P43004 574 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 EIF3BP55884 814 aaKnown RBP24.52■■□□□ 1.52
PERM1-203ENST00000479361 PLOD1Q02809 727 aaPredicted RBP24.52■■□□□ 1.52
PERM1-203ENST00000479361 RPA4Q13156 261 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 CTBP1Q13363 440 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 DENND6AQ8IWF6 608 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 TRIM48Q8IWZ4 208 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 UNC5BQ8IZJ1 945 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 GSDMBQ8TAX9 411 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 ADAMTS14Q8WXS8 1223 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 IFT81Q8WYA0 676 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 ELMO1Q92556 727 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 SH3KBP1Q96B97 665 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 CCDC3Q9BQI4 270 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 COG4Q9H9E3 785 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 PLAC1Q9HBJ0 212 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 SARS2Q9NP81 518 aaKnown RBP24.52■■□□□ 1.52
PERM1-203ENST00000479361 CPNE7Q9UBL6 633 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 FBXO5Q9UKT4 447 aa24.52■■□□□ 1.52
PERM1-203ENST00000479361 S1PR4O95977 384 aa24.51■■□□□ 1.51
PERM1-203ENST00000479361 BRAFP15056 766 aa24.51■■□□□ 1.51
PERM1-203ENST00000479361 XRCC1P18887 633 aaPredicted RBP24.51■■□□□ 1.51
PERM1-203ENST00000479361 HHEXQ03014 270 aa24.51■■□□□ 1.51
PERM1-203ENST00000479361 CUL1Q13616 776 aa24.51■■□□□ 1.51
PERM1-203ENST00000479361 SYTL3Q4VX76 610 aa24.51■■□□□ 1.51
PERM1-203ENST00000479361 PERM1Q5SV97 790 aa24.51■■□□□ 1.51
PERM1-203ENST00000479361 KIAA0408Q6ZU52 694 aa24.51■■□□□ 1.51
PERM1-203ENST00000479361 ZNF438Q7Z4V0 828 aa24.51■■□□□ 1.51
PERM1-203ENST00000479361 IFT20Q8IY31 132 aa24.51■■□□□ 1.51
PERM1-203ENST00000479361 WDR48Q8TAF3 677 aa24.51■■□□□ 1.51
PERM1-203ENST00000479361 PSMD13Q9UNM6 376 aa24.51■■□□□ 1.51
PERM1-203ENST00000479361 WDR37Q9Y2I8 494 aa24.51■■□□□ 1.51
PERM1-203ENST00000479361 CRYL1Q9Y2S2 319 aa24.51■■□□□ 1.51
PERM1-203ENST00000479361 FMO4P31512 558 aa24.5■■□□□ 1.51
PERM1-203ENST00000479361 GPR3P46089 330 aa24.5■■□□□ 1.51
PERM1-203ENST00000479361 ZNF658BQ4V348 819 aaPredicted RBP24.5■■□□□ 1.51
PERM1-203ENST00000479361 DHRS13Q6UX07 377 aa24.5■■□□□ 1.51
PERM1-203ENST00000479361 CNTN4Q8IWV2 1026 aa24.5■■□□□ 1.51
PERM1-203ENST00000479361 C2CD4AQ8NCU7 369 aaPredicted RBP24.5■■□□□ 1.51
PERM1-203ENST00000479361 CXorf40BQ96DE9 158 aa24.5■■□□□ 1.51
PERM1-203ENST00000479361 BIRC8Q96P09 236 aa24.5■■□□□ 1.51
PERM1-203ENST00000479361 WWP1Q9H0M0 922 aa24.5■■□□□ 1.51
PERM1-203ENST00000479361 CCDC68Q9H2F9 335 aa24.5■■□□□ 1.51
PERM1-203ENST00000479361 FBXO6Q9NRD1 293 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms