RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 E2F1Q01094 437 aa26.3■■□□□ 1.8
CCM2-211ENST00000478582 HLTFQ14527 1009 aaKnown RBP eCLIP26.3■■□□□ 1.8
CCM2-211ENST00000478582 C14orf28Q4W4Y0 310 aa26.3■■□□□ 1.8
CCM2-211ENST00000478582 RNF187Q5TA31 235 aaPredicted RBP26.3■■□□□ 1.8
CCM2-211ENST00000478582 AGAP9Q5VTM2 703 aa26.3■■□□□ 1.8
CCM2-211ENST00000478582 CILP2Q8IUL8 1156 aa26.3■■□□□ 1.8
CCM2-211ENST00000478582 FBXO36Q8NEA4 188 aa26.3■■□□□ 1.8
CCM2-211ENST00000478582 CALML6Q8TD86 181 aa26.3■■□□□ 1.8
CCM2-211ENST00000478582 CCM2Q9BSQ5 444 aa26.3■■□□□ 1.8
CCM2-211ENST00000478582 VPS37BQ9H9H4 285 aa26.3■■□□□ 1.8
CCM2-211ENST00000478582 IL1RAPL1Q9NZN1 696 aa26.3■■□□□ 1.8
CCM2-211ENST00000478582 DNAJC16Q9Y2G8 782 aa26.3■■□□□ 1.8
CCM2-211ENST00000478582 BPTFQ12830 3046 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 OR5K4A6NMS3 321 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 PRMT5O14744 637 aaPredicted RBP26.29■■□□□ 1.8
CCM2-211ENST00000478582 EML2O95834 649 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 OR56A5P0C7T3 313 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 MYF5P13349 255 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 F3P13726 295 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 SLC2A4P14672 509 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 RPS3P23396 243 aaKnown RBP eCLIP26.29■■□□□ 1.8
CCM2-211ENST00000478582 CAMK2BQ13554 666 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 FASTKD3Q14CZ7 662 aaKnown RBP26.29■■□□□ 1.8
CCM2-211ENST00000478582 ZNF658BQ4V348 819 aaPredicted RBP26.29■■□□□ 1.8
CCM2-211ENST00000478582 METRNLQ641Q3 311 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 IYDQ6PHW0 289 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 ABRAXAS1Q6UWZ7 409 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 KCNMB4Q86W47 210 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 LRRC6Q86X45 466 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 ANKMY2Q8IV38 441 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 SFTPA2Q8IWL1 248 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 ZBED8Q8IZ13 594 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 OTUD6BQ8N6M0 293 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 NAT6Q93015 286 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 P2RY12Q9H244 342 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 OSGEPL1Q9H4B0 414 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 VPS9D1Q9Y2B5 631 aa26.29■■□□□ 1.8
CCM2-211ENST00000478582 CACNA1BQ00975 2339 aa26.28■■□□□ 1.8
CCM2-211ENST00000478582 GP1BAP07359 652 aa26.28■■□□□ 1.8
CCM2-211ENST00000478582 ADARP55265 1226 aaKnown RBP26.28■■□□□ 1.8
CCM2-211ENST00000478582 XKR5Q6UX68 686 aa26.28■■□□□ 1.8
CCM2-211ENST00000478582 UNC5BQ8IZJ1 945 aa26.28■■□□□ 1.8
CCM2-211ENST00000478582 SFRP1Q8N474 314 aa26.28■■□□□ 1.8
CCM2-211ENST00000478582 HM13Q8TCT9 377 aa26.28■■□□□ 1.8
CCM2-211ENST00000478582 PYROXD1Q8WU10 500 aa26.28■■□□□ 1.8
CCM2-211ENST00000478582 CFAP36Q96G28 342 aa26.28■■□□□ 1.8
CCM2-211ENST00000478582 FAM167BQ9BTA0 163 aa26.28■■□□□ 1.8
CCM2-211ENST00000478582 SAYSD1Q9NPB0 183 aa26.28■■□□□ 1.8
CCM2-211ENST00000478582 PRDM8Q9NQV8 689 aa26.28■■□□□ 1.8
CCM2-211ENST00000478582 INTS10Q9NVR2 710 aaKnown RBP26.28■■□□□ 1.8
CCM2-211ENST00000478582 USP24Q9UPU5 2620 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 KMT2BQ9UMN6 2715 aaPredicted RBP26.27■■□□□ 1.8
CCM2-211ENST00000478582 KIR2DS5A0A0G2JLQ3 304 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 A0A0G2JNG1 304 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 TRABD2BA6NFA1 517 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 KIR2DS3K7RE56 304 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 SNX2O60749 519 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 S1PR4O95977 384 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 FTH1P02794 183 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 GLB1P16278 677 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 CLDN6P56747 220 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 NFE2L1Q14494 772 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 KIR2DS5Q14953 304 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 HSP90AA5PQ58FG0 334 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 HES3Q5TGS1 186 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 ZNF470Q6ECI4 717 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 FAM83HQ6ZRV2 1179 aaPredicted RBP26.27■■□□□ 1.8
CCM2-211ENST00000478582 CACTIN-AS1Q8N1I8 211 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 ARL14Q8N4G2 192 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 GABPB2Q8TAK5 448 aaPredicted RBP26.27■■□□□ 1.8
CCM2-211ENST00000478582 LPGAT1Q92604 370 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 CERS2Q96G23 380 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 ACSL5Q9ULC5 683 aa26.27■■□□□ 1.8
CCM2-211ENST00000478582 ZFC3H1O60293 1989 aaKnown RBP26.26■■□□□ 1.79
CCM2-211ENST00000478582 NUDT21O43809 227 aaKnown RBP26.26■■□□□ 1.79
CCM2-211ENST00000478582 PNLIPP16233 465 aa26.26■■□□□ 1.79
CCM2-211ENST00000478582 PBLDP30039 288 aaPredicted RBP26.26■■□□□ 1.79
CCM2-211ENST00000478582 GUSBP11Q6P575 273 aa26.26■■□□□ 1.79
CCM2-211ENST00000478582 CNTN4Q8IWV2 1026 aa26.26■■□□□ 1.79
CCM2-211ENST00000478582 LRRN4CLQ8ND94 238 aa26.26■■□□□ 1.79
CCM2-211ENST00000478582 IFI44Q8TCB0 444 aa26.26■■□□□ 1.79
CCM2-211ENST00000478582 PATE1Q8WXA2 126 aa26.26■■□□□ 1.79
CCM2-211ENST00000478582 CCDC86Q9H6F5 360 aaKnown RBP26.26■■□□□ 1.79
CCM2-211ENST00000478582 FBXO5Q9UKT4 447 aa26.26■■□□□ 1.79
CCM2-211ENST00000478582 IGF2RP11717 2491 aa26.26■■□□□ 1.79
CCM2-211ENST00000478582 CPED1A4D0V7 1026 aa26.25■■□□□ 1.79
CCM2-211ENST00000478582 ERVK-10P10266 1014 aa26.25■■□□□ 1.79
CCM2-211ENST00000478582 BRAFP15056 766 aa26.25■■□□□ 1.79
CCM2-211ENST00000478582 SLC1A2P43004 574 aa26.25■■□□□ 1.79
CCM2-211ENST00000478582 FASLGP48023 281 aa26.25■■□□□ 1.79
CCM2-211ENST00000478582 MAZP56270 477 aaKnown RBP26.25■■□□□ 1.79
CCM2-211ENST00000478582 INSM1Q01101 510 aaPredicted RBP26.25■■□□□ 1.79
CCM2-211ENST00000478582 CTBP1Q13363 440 aa26.25■■□□□ 1.79
CCM2-211ENST00000478582 EFL1Q7Z2Z2 1120 aaKnown RBP26.25■■□□□ 1.79
CCM2-211ENST00000478582 DENND6AQ8IWF6 608 aa26.25■■□□□ 1.79
CCM2-211ENST00000478582 CFAP206Q8IYR0 622 aa26.25■■□□□ 1.79
CCM2-211ENST00000478582 GSDMBQ8TAX9 411 aa26.25■■□□□ 1.79
CCM2-211ENST00000478582 MAPK15Q8TD08 544 aa26.25■■□□□ 1.79
CCM2-211ENST00000478582 SLC37A2Q8TED4 501 aa26.25■■□□□ 1.79
CCM2-211ENST00000478582 BIRC8Q96P09 236 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms