RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SLC12A9Q9BXP2 914 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 HDAC8Q9BY41 377 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 NKX2-4Q9H2Z4 354 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 TMEM245Q9H330 911 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 SARS2Q9NP81 518 aaKnown RBP7.82□□□□□ -1.16
VMA21-203ENST00000477649 BAIAP2L1Q9UHR4 511 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 PTBP2Q9UKA9 531 aaKnown RBP7.82□□□□□ -1.16
VMA21-203ENST00000477649 PCTPQ9UKL6 214 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 FNDC3AQ9Y2H6 1198 aaKnown RBP7.82□□□□□ -1.16
VMA21-203ENST00000477649 ZNF106Q9H2Y7 1883 aaKnown RBP7.81□□□□□ -1.16
VMA21-203ENST00000477649 COL6A3P12111 3177 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 TBC1D3BA6NDS4 549 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 PSMD12O00232 456 aaPredicted RBP7.81□□□□□ -1.16
VMA21-203ENST00000477649 E2F3O00716 465 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 NEMP1O14524 444 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 AREL1O15033 823 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 AP1G1O43747 822 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 CCNT2O60583 730 aaKnown RBP7.81□□□□□ -1.16
VMA21-203ENST00000477649 RNASEH1O60930 286 aaKnown RBP7.81□□□□□ -1.16
VMA21-203ENST00000477649 FKBP6O75344 327 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 APODP05090 189 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 IDO1P14902 403 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 ARSAP15289 507 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 LBPP18428 481 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 UGT1A6P19224 532 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 CYP2A7P20853 494 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 UGT1A1P22309 533 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 UGT1A4P22310 534 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 FCARP24071 287 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 AOAHP28039 575 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 AKT1P31749 480 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 UGT1A3P35503 534 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 UGT1A5P35504 534 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 GGT5P36269 586 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 CPOXP36551 454 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 TNFRSF4P43489 277 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 PGGT1BP53609 377 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 DPTQ07507 201 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 RALGDSQ12967 914 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 PPP1R3AQ16821 1122 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 GAB4Q2WGN9 574 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 ITPRIPL2Q3MIP1 535 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 COQ5Q5HYK3 327 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 C9orf64Q5T6V5 341 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 PRPF38BQ5VTL8 546 aaKnown RBP7.81□□□□□ -1.16
VMA21-203ENST00000477649 FBXL19Q6PCT2 694 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 AAGABQ6PD74 315 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 SYCE2Q6PIF2 218 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 SERPINA13PQ6UXR4 307 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 LIPIQ6XZB0 460 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 HACD2Q6Y1H2 254 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 CYHR1Q6ZMK1 362 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 RINLQ6ZS11 566 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 SPRED2Q7Z698 418 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 PHYKPLQ8IUZ5 450 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 FAM9CQ8IZT9 166 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 ENDOVQ8N8Q3 282 aaKnown RBP7.81□□□□□ -1.16
VMA21-203ENST00000477649 KYQ8NBH2 561 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 AGR3Q8TD06 166 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 MCOLN3Q8TDD5 553 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 TRPC4APQ8TEL6 797 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 TWIST2Q8WVJ9 160 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 ATL1Q8WXF7 558 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 STMN2Q93045 179 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 EXT2Q93063 718 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 GLYATL1Q969I3 302 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 DTD2Q96FN9 168 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 LENG8Q96PV6 779 aaPredicted RBP7.81□□□□□ -1.16
VMA21-203ENST00000477649 SLC30A3Q99726 388 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 MRPL1Q9BYD6 325 aaKnown RBP7.81□□□□□ -1.16
VMA21-203ENST00000477649 UNKQ9C0B0 810 aaKnown RBP7.81□□□□□ -1.16
VMA21-203ENST00000477649 EBF3Q9H4W6 596 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 WDR55Q9H6Y2 383 aaPredicted RBP7.81□□□□□ -1.16
VMA21-203ENST00000477649 RNPEPL1Q9HAU8 725 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 PARVBQ9HBI1 364 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 HPS4Q9NQG7 708 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 THAP10Q9P2Z0 257 aaPredicted RBP7.81□□□□□ -1.16
VMA21-203ENST00000477649 DNAJC15Q9Y5T4 150 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 COPG1Q9Y678 874 aaKnown RBP7.81□□□□□ -1.16
VMA21-203ENST00000477649 A0A0C4DFX4 3053 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 NOTCH4Q99466 2003 aa7.81□□□□□ -1.16
VMA21-203ENST00000477649 C17orf113A0A1B0GUU1 675 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 GRXCR2A6NFK2 248 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 GPR89AB7ZAQ6 455 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 PRRT4C9JH25 899 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 K7EPI3 171 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 IFRD1O00458 451 aaPredicted RBP7.8□□□□□ -1.16
VMA21-203ENST00000477649 KPNA3O00505 521 aaPredicted RBP7.8□□□□□ -1.16
VMA21-203ENST00000477649 UBFD1O14562 309 aaKnown RBP7.8□□□□□ -1.16
VMA21-203ENST00000477649 TSPAN6O43657 245 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 VEGFDO43915 354 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 ATG13O75143 517 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 SLCO2B1O94956 709 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 SIX3O95343 332 aaPredicted RBP7.8□□□□□ -1.16
VMA21-203ENST00000477649 MATN4O95460 622 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 CTSLP07711 333 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 SNRPB2P08579 225 aaKnown RBP7.8□□□□□ -1.16
VMA21-203ENST00000477649 EBLN1P0CF75 366 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 GPR89BP0CG08 455 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 TEAD1P28347 426 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms