RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-210	ENST00000477625	CDKN1C	P49918	316 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	CACNG1	Q06432	222 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	VAC14	Q08AM6	782 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	LAMB3	Q13751	1172 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	TGIF1	Q15583	401 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	ARHGAP40	Q5TG30	622 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	PPP1R21	Q6ZMI0	780 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	TAS2R42	Q7RTR8	314 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	SERPINA9	Q86WD7	417 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	ZFAND4	Q86XD8	727 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	FAM129C	Q86XR2	697 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	DTX1	Q86Y01	620 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	CFAP206	Q8IYR0	622 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	GLIS1	Q8NBF1	620 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	SNRNP27	Q8WVK2	155 aa	Known RBP	11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	ART4	Q93070	314 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	CCNL2	Q96S94	520 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	DDA1	Q9BW61	102 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	ASPSCR1	Q9BZE9	553 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	HOMER3	Q9NSC5	361 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	SLC39A1	Q9NY26	324 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	KLHL3	Q9UH77	587 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	PCDHB11	Q9Y5F2	797 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	MN1	Q10571	1320 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	AHCTF1	Q8WYP5	2266 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	CACNA1G	O43497	2377 aa		11.99	□□□□□ -0.49
PTPN7-210	ENST00000477625	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	C17orf113	A0A1B0GUU1	675 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	HEATR9	A2RTY3	570 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	GOLGA6L3	A6NEY3	463 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625		K7ENP7	123 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	TOX3	O15405	576 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	CAPN5	O15484	640 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	APRT	P07741	180 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	ANKRD34C	P0C6C1	535 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	ZSCAN5DP	P0CG00	497 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	PRSS56	P0CW18	603 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	MTHFD1	P11586	935 aa	Known RBP	11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	ADRA1D	P25100	572 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	ACRV1	P26436	265 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	PRLHR	P49683	370 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	ARSD	P51689	593 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	GFER	P55789	205 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	RAB15	P59190	212 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	MC2R	Q01718	297 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	CCDC38	Q502W7	563 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	DCAF12	Q5T6F0	453 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	INO80C	Q6PI98	192 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	XKR5	Q6UX68	686 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	C4orf22	Q6V702	233 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	CCDC81	Q6ZN84	652 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	GSTA5	Q7RTV2	222 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	PIANP	Q8IYJ0	282 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	BMPER	Q8N8U9	685 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	ZFPM2	Q8WW38	1151 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	PMEPA1	Q969W9	287 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	ZDHHC12	Q96GR4	267 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	C9orf72	Q96LT7	481 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	RANBP9	Q96S59	729 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	UBL7	Q96S82	380 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	INSM2	Q96T92	566 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	CCM2	Q9BSQ5	444 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	RAB33B	Q9H082	229 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	WWP1	Q9H0M0	922 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	CASS4	Q9NQ75	786 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	FBXO8	Q9NRD0	319 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	IMP3	Q9NV31	184 aa	Known RBP	11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	WDR70	Q9NW82	654 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	JRKL	Q9Y4A0	524 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	B3GALT1	Q9Y5Z6	326 aa		11.98	□□□□□ -0.49
PTPN7-210	ENST00000477625	LOC400499	M0QZD8	3231 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	CCDC78	A2IDD5	438 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	STMND1	H3BQB6	276 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	EFS	O43281	561 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	POLB	P06746	335 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	SLC35G4	P0C7Q5	338 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	MSN	P26038	577 aa	Known RBP	11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	CAPZB	P47756	277 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	KCNJ1	P48048	391 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	LEPR	P48357	1165 aa	Known RBP	11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	ANKS6	Q68DC2	871 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	KLHL35	Q6PF15	583 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	MICALCL	Q6ZW33	695 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	NLRP9	Q7RTR0	991 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	CLDN19	Q8N6F1	224 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	OR13J1	Q8NGT2	312 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	GPR150	Q8NGU9	434 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	HM13	Q8TCT9	377 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	RSC1A1	Q92681	617 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	C12orf66	Q96MD2	445 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	TGM7	Q96PF1	710 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	BBC3	Q96PG8	261 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	TEFM	Q96QE5	360 aa	Known RBP	11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	VPS37B	Q9H9H4	285 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	EIF2B3	Q9NR50	452 aa	Known RBP	11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	FAM8A1	Q9UBU6	413 aa		11.97	□□□□□ -0.49
PTPN7-210	ENST00000477625	EPHA6	Q9UF33	1036 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms