RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 SCN3AQ9NY46 2000 aa13.81□□□□□ -0.2
SRRT-210ENST00000477529 PIEZO2Q9H5I5 2752 aa13.81□□□□□ -0.2
SRRT-210ENST00000477529 ATRXP46100 2492 aa13.81□□□□□ -0.2
SRRT-210ENST00000477529 PRAMEF33A0A0G2JMD5 474 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 CTAGE9A4FU28 777 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 KLHL33A6NCF5 533 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 AP3B1O00203 1094 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 ZW10O43264 779 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 TLX3O43711 291 aaPredicted RBP13.8□□□□□ -0.2
SRRT-210ENST00000477529 DUX1O43812 170 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 THRAP10827 490 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 HOXB3P14651 431 aaPredicted RBP13.8□□□□□ -0.2
SRRT-210ENST00000477529 NMBRP28336 390 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 EPHA4P54764 986 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 PRAMEP78395 509 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 SQSTM1Q13501 440 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 ITIH4Q14624 930 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 TBC1D25Q3MII6 688 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 PCID2Q5JVF3 399 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 TMEM26Q6ZUK4 368 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 USP53Q70EK8 1073 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 TAS2R42Q7RTR8 314 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 PIM3Q86V86 326 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 CAND1Q86VP6 1230 aaKnown RBP13.8□□□□□ -0.2
SRRT-210ENST00000477529 TRIM48Q8IWZ4 208 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 CLDN19Q8N6F1 224 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 HM13Q8TCT9 377 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 SLCO2A1Q92959 643 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 SH3KBP1Q96B97 665 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 SGSM3Q96HU1 749 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 STRADBQ9C0K7 418 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 UCK1Q9HA47 277 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 MRM3Q9HC36 420 aaKnown RBP13.8□□□□□ -0.2
SRRT-210ENST00000477529 BFARQ9NZS9 450 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 TMEM9Q9P0T7 183 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 PCYOX1Q9UHG3 505 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 RAXQ9Y2V3 346 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 PCDHGA8Q9Y5G5 932 aa13.8□□□□□ -0.2
SRRT-210ENST00000477529 IGHV5-10-1A0A0J9YXX1 117 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 TMX2-CTNND1H3BSU7 103 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 AVILO75366 819 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 VIPP01282 170 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 HGFP14210 728 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 ARNTP27540 789 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 HALP42357 657 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 NPY2RP49146 381 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 LIMK2P53671 638 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 EIF3IQ13347 325 aaKnown RBP13.79□□□□□ -0.2
SRRT-210ENST00000477529 PTK6Q13882 451 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 GPR18Q14330 331 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 C16orf72Q14CZ0 275 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 PHF19Q5T6S3 580 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 RAB11FIP2Q7L804 512 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 MPP5Q8N3R9 675 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 RCBTB1Q8NDN9 531 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 MCUQ8NE86 351 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 OR4D9Q8NGE8 314 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 OR6P1Q8NGX9 317 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 OR4L1Q8NH43 312 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 OR10G6Q8NH81 332 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 SNIP1Q8TAD8 396 aaKnown RBP13.79□□□□□ -0.2
SRRT-210ENST00000477529 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.79□□□□□ -0.2
SRRT-210ENST00000477529 CXorf40BQ96DE9 158 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 MFSD3Q96ES6 412 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 CCDC74BQ96LY2 380 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 RMDN2Q96LZ7 410 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 SERPINB12Q96P63 405 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 KIFC1Q9BW19 673 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.79□□□□□ -0.2
SRRT-210ENST00000477529 WWP1Q9H0M0 922 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 COG4Q9H9E3 785 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 SLC40A1Q9NP59 571 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 OGFRQ9NZT2 677 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 SOX13Q9UN79 622 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 PRSS21Q9Y6M0 314 aa13.79□□□□□ -0.2
SRRT-210ENST00000477529 MN1Q10571 1320 aaPredicted RBP13.79□□□□□ -0.2
SRRT-210ENST00000477529 C17orf113A0A1B0GUU1 675 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 CDRT15L2A8MXV6 281 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 PLD2O14939 933 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 AP2A2O94973 939 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 SLC35G4P0C7Q5 338 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 MTHFD1P11586 935 aaKnown RBP13.78□□□□□ -0.2
SRRT-210ENST00000477529 NSG1P42857 185 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 PTGIRP43119 386 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 MAGEA3P43357 314 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 PPP1R7Q15435 360 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 RPE65Q16518 533 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 DUS1LQ6P1R4 473 aaKnown RBP13.78□□□□□ -0.2
SRRT-210ENST00000477529 FOXR1Q6PIV2 292 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 WDR74Q6RFH5 385 aaPredicted RBP13.78□□□□□ -0.2
SRRT-210ENST00000477529 LSMEM2Q8N112 164 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 AGGF1Q8N302 714 aaeCLIP13.78□□□□□ -0.2
SRRT-210ENST00000477529 NAT8LQ8N9F0 302 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 SPDYE1Q8NFV5 336 aaPredicted RBP13.78□□□□□ -0.2
SRRT-210ENST00000477529 AHCYL2Q96HN2 611 aaKnown RBP13.78□□□□□ -0.2
SRRT-210ENST00000477529 SLC46A1Q96NT5 459 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 TRIM56Q9BRZ2 755 aaKnown RBP13.78□□□□□ -0.2
SRRT-210ENST00000477529 ZMYND15Q9H091 742 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 EPB41L1Q9H4G0 881 aa13.78□□□□□ -0.2
SRRT-210ENST00000477529 VPS37BQ9H9H4 285 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms