RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 KNL1Q8NG31 2342 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 LAMA1P25391 3075 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 TPP1O14773 563 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 KHNYNO15037 678 aaKnown RBP16.63■□□□□ 0.25
EPHB4-204ENST00000477446 MTX2O75431 263 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 RASSF9O75901 435 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 ALDOAP04075 364 aaKnown RBP16.63■□□□□ 0.25
EPHB4-204ENST00000477446 CTSKP43235 329 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 RASSF2P50749 326 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 SPEM2Q0P670 501 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 ILF2Q12905 390 aaKnown RBP16.63■□□□□ 0.25
EPHB4-204ENST00000477446 GRIK2Q13002 908 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 SPRED3Q2MJR0 410 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 CCDC153Q494R4 210 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 KHDC1Q4VXA5 237 aaKnown RBP16.63■□□□□ 0.25
EPHB4-204ENST00000477446 FASTKD1Q53R41 847 aaKnown RBP16.63■□□□□ 0.25
EPHB4-204ENST00000477446 GPRC6AQ5T6X5 926 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 TCEAL6Q6IPX3 200 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 DOK6Q6PKX4 331 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 ENPP7Q6UWV6 458 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 STRA8Q7Z7C7 330 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 SERPINA9Q86WD7 417 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 NXPE1Q8N323 547 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 DDHD1Q8NEL9 900 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 OR56A4Q8NGH8 313 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 TCEAL3Q969E4 200 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 ULK4Q96C45 1275 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 WDR92Q96MX6 357 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 SIKE1Q9BRV8 207 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 C12orf65Q9H3J6 166 aaKnown RBP16.63■□□□□ 0.25
EPHB4-204ENST00000477446 TRIM39Q9HCM9 518 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 SAR1AQ9NR31 198 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 CATSPERZQ9NTU4 200 aa16.63■□□□□ 0.25
EPHB4-204ENST00000477446 MARCH4Q9P2E8 410 aaPredicted RBP16.63■□□□□ 0.25
EPHB4-204ENST00000477446 PNMA8BQ9ULN7 279 aaPredicted RBP16.63■□□□□ 0.25
EPHB4-204ENST00000477446 LRP4O75096 1905 aa16.62■□□□□ 0.25
EPHB4-204ENST00000477446 CD3EAPO15446 510 aaKnown RBP16.62■□□□□ 0.25
EPHB4-204ENST00000477446 CEACAM5P06731 702 aa16.62■□□□□ 0.25
EPHB4-204ENST00000477446 ZNF806P0C7X5 589 aa16.62■□□□□ 0.25
EPHB4-204ENST00000477446 KELP23276 732 aa16.62■□□□□ 0.25
EPHB4-204ENST00000477446 ACRV1P26436 265 aa16.62■□□□□ 0.25
EPHB4-204ENST00000477446 ARFIP2P53365 341 aa16.62■□□□□ 0.25
EPHB4-204ENST00000477446 SEMA3AQ14563 771 aa16.62■□□□□ 0.25
EPHB4-204ENST00000477446 LDLRAP1Q5SW96 308 aa16.62■□□□□ 0.25
EPHB4-204ENST00000477446 NUSAP1Q9BXS6 441 aaKnown RBP16.62■□□□□ 0.25
EPHB4-204ENST00000477446 FGF22Q9HCT0 170 aa16.62■□□□□ 0.25
EPHB4-204ENST00000477446 SLC40A1Q9NP59 571 aa16.62■□□□□ 0.25
EPHB4-204ENST00000477446 NPHS2Q9NP85 383 aa16.62■□□□□ 0.25
EPHB4-204ENST00000477446 MRPL40Q9NQ50 206 aaKnown RBP16.62■□□□□ 0.25
EPHB4-204ENST00000477446 MID2Q9UJV3 735 aa16.62■□□□□ 0.25
EPHB4-204ENST00000477446 SLC17A4Q9Y2C5 497 aa16.62■□□□□ 0.25
EPHB4-204ENST00000477446 OTOGLQ3ZCN5 2332 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 ARHGAP33O14559 1287 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 FUCA1P04066 466 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 TMEM115Q12893 351 aaPredicted RBP16.61■□□□□ 0.25
EPHB4-204ENST00000477446 EIF2B5Q13144 721 aaKnown RBP16.61■□□□□ 0.25
EPHB4-204ENST00000477446 HSP90AA5PQ58FG0 334 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 ZNF542PQ5EBM4 170 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 PRAMEF14Q5SWL7 426 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 NEPROQ6NW34 567 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 ASCL5Q7RTU5 278 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 ADGRG6Q86SQ4 1221 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 LDB1Q86U70 411 aaPredicted RBP16.61■□□□□ 0.25
EPHB4-204ENST00000477446 PARGQ86W56 976 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 CRLF3Q8IUI8 442 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 CNTN4Q8IWV2 1026 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 DCLK2Q8N568 766 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 TSACCQ96A04 125 aaPredicted RBP16.61■□□□□ 0.25
EPHB4-204ENST00000477446 CCDC97Q96F63 343 aaPredicted RBP16.61■□□□□ 0.25
EPHB4-204ENST00000477446 OR2AG1Q9H205 316 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 CAAP1Q9H8G2 361 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 THAP1Q9NVV9 213 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 KCNK4Q9NYG8 393 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 ATXN10Q9UBB4 475 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 KLF15Q9UIH9 416 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 PSAT1Q9Y617 370 aa16.61■□□□□ 0.25
EPHB4-204ENST00000477446 TDRD6O60522 2096 aaKnown RBP16.6■□□□□ 0.25
EPHB4-204ENST00000477446 PRSS38A1L453 326 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 TNFRSF10CO14798 259 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 PLIN3O60664 434 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 DNAJC6O75061 913 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 UNC5CO95185 931 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 SYPP08247 313 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 GRK2P25098 689 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 SRP54P61011 504 aaKnown RBP16.6■□□□□ 0.25
EPHB4-204ENST00000477446 NCALDP61601 193 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 STX3Q13277 289 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 THOC5Q13769 683 aaKnown RBP16.6■□□□□ 0.25
EPHB4-204ENST00000477446 SF3A2Q15428 464 aaKnown RBP16.6■□□□□ 0.25
EPHB4-204ENST00000477446 CHI3L2Q15782 390 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 ALG11Q2TAA5 492 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 CERS6Q6ZMG9 384 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 GPR150Q8NGU9 434 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 SREK1Q8WXA9 508 aaKnown RBP16.6■□□□□ 0.25
EPHB4-204ENST00000477446 OR1E3Q8WZA6 343 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.6■□□□□ 0.252e-6■■■■■ 54.9
EPHB4-204ENST00000477446 KLHL29Q96CT2 875 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 PDXPQ96GD0 296 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 COPS8Q99627 209 aa16.6■□□□□ 0.25
EPHB4-204ENST00000477446 MCMBPQ9BTE3 642 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms