RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 GUSBP11Q6P575 273 aa29.02■■■□□ 2.24
HOXB3-208ENST00000476342 IYDQ6PHW0 289 aa29.02■■■□□ 2.24
HOXB3-208ENST00000476342 CEP128Q6ZU80 1094 aa29.02■■■□□ 2.24
HOXB3-208ENST00000476342 SFTPA2Q8IWL1 248 aa29.02■■■□□ 2.24
HOXB3-208ENST00000476342 PALM2Q8IXS6 379 aa29.02■■■□□ 2.24
HOXB3-208ENST00000476342 UNC5BQ8IZJ1 945 aa29.02■■■□□ 2.24
HOXB3-208ENST00000476342 SFRP1Q8N474 314 aa29.02■■■□□ 2.24
HOXB3-208ENST00000476342 GSDMBQ8TAX9 411 aa29.02■■■□□ 2.24
HOXB3-208ENST00000476342 IFI44Q8TCB0 444 aa29.02■■■□□ 2.24
HOXB3-208ENST00000476342 PATE1Q8WXA2 126 aa29.02■■■□□ 2.24
HOXB3-208ENST00000476342 IFT81Q8WYA0 676 aa29.02■■■□□ 2.24
HOXB3-208ENST00000476342 PPANQ9NQ55 473 aaKnown RBP29.02■■■□□ 2.24
HOXB3-208ENST00000476342 FAM8A1Q9UBU6 413 aa29.02■■■□□ 2.24
HOXB3-208ENST00000476342 EML2O95834 649 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 ERVK-10P10266 1014 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 CDK4P11802 303 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 GLB1P16278 677 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 RPL10P27635 214 aaKnown RBP29.01■■■□□ 2.23
HOXB3-208ENST00000476342 HALP42357 657 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 SLC1A2P43004 574 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 ADARP55265 1226 aaKnown RBP29.01■■■□□ 2.23
HOXB3-208ENST00000476342 EIF3BP55884 814 aaKnown RBP29.01■■■□□ 2.23
HOXB3-208ENST00000476342 AGAP9Q5VTM2 703 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 PTRHD1Q6GMV3 140 aaKnown RBP29.01■■■□□ 2.23
HOXB3-208ENST00000476342 ABRAXAS1Q6UWZ7 409 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 EFL1Q7Z2Z2 1120 aaKnown RBP29.01■■■□□ 2.23
HOXB3-208ENST00000476342 DENND6AQ8IWF6 608 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 ARL14Q8N4G2 192 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 AVL9Q8NBF6 648 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 LPGAT1Q92604 370 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 TSPYL1Q9H0U9 437 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 P2RY12Q9H244 342 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 STN1Q9H668 368 aaKnown RBP29.01■■■□□ 2.23
HOXB3-208ENST00000476342 PLAC1Q9HBJ0 212 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 PCDHB1Q9Y5F3 818 aa29.01■■■□□ 2.23
HOXB3-208ENST00000476342 NUDT21O43809 227 aaKnown RBP29■■■□□ 2.23
HOXB3-208ENST00000476342 RHOXF2BP0C7M4 288 aa29■■■□□ 2.23
HOXB3-208ENST00000476342 MAZP56270 477 aaKnown RBP29■■■□□ 2.23
HOXB3-208ENST00000476342 CTBP1Q13363 440 aa29■■■□□ 2.23
HOXB3-208ENST00000476342 CUL1Q13616 776 aa29■■■□□ 2.23
HOXB3-208ENST00000476342 CCDC157Q569K6 752 aa29■■■□□ 2.23
HOXB3-208ENST00000476342 ZNF449Q6P9G9 518 aa29■■■□□ 2.23
HOXB3-208ENST00000476342 FAM83HQ6ZRV2 1179 aaPredicted RBP29■■■□□ 2.23
HOXB3-208ENST00000476342 SLC9B2Q86UD5 537 aa29■■■□□ 2.23
HOXB3-208ENST00000476342 IFT20Q8IY31 132 aa29■■■□□ 2.23
HOXB3-208ENST00000476342 CFAP206Q8IYR0 622 aa29■■■□□ 2.23
HOXB3-208ENST00000476342 SLC37A2Q8TED4 501 aa29■■■□□ 2.23
HOXB3-208ENST00000476342 PANX3Q96QZ0 392 aa29■■■□□ 2.23
HOXB3-208ENST00000476342 RHOXF2Q9BQY4 288 aa29■■■□□ 2.23
HOXB3-208ENST00000476342 FBXO5Q9UKT4 447 aa29■■■□□ 2.23
HOXB3-208ENST00000476342 ESR1P03372 595 aa28.99■■■□□ 2.23
HOXB3-208ENST00000476342 CNTN4Q8IWV2 1026 aa28.99■■■□□ 2.23
HOXB3-208ENST00000476342 LRRN4CLQ8ND94 238 aa28.99■■■□□ 2.23
HOXB3-208ENST00000476342 ELMO1Q92556 727 aa28.99■■■□□ 2.23
HOXB3-208ENST00000476342 COG4Q9H9E3 785 aa28.99■■■□□ 2.23
HOXB3-208ENST00000476342 LRIT1Q9P2V4 623 aa28.99■■■□□ 2.23
HOXB3-208ENST00000476342 CRYL1Q9Y2S2 319 aa28.99■■■□□ 2.23
HOXB3-208ENST00000476342 H3BMM5 538 aa28.98■■■□□ 2.23
HOXB3-208ENST00000476342 LIN7AO14910 233 aaPredicted RBP28.98■■■□□ 2.23
HOXB3-208ENST00000476342 S1PR4O95977 384 aa28.98■■■□□ 2.23
HOXB3-208ENST00000476342 FASLGP48023 281 aa28.98■■■□□ 2.23
HOXB3-208ENST00000476342 SLCO6A1Q86UG4 719 aa28.98■■■□□ 2.23
HOXB3-208ENST00000476342 FMO2Q99518 471 aa28.98■■■□□ 2.23
HOXB3-208ENST00000476342 FBXO6Q9NRD1 293 aaPredicted RBP28.98■■■□□ 2.23
HOXB3-208ENST00000476342 TRBV23OR9-2A0A075B6M9 112 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 RHPN2P1A8MT19 583 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 DKK1O94907 266 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 GSTA2P09210 222 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 SLC35G4P0C7Q5 338 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 BRAFP15056 766 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 PNLIPP16233 465 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 MAGEA4P43358 317 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 E2F1Q01094 437 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 PLOD1Q02809 727 aaPredicted RBP28.97■■■□□ 2.23
HOXB3-208ENST00000476342 RPA4Q13156 261 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 TEX35Q5T0J7 233 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 TRMT10BQ6PF06 316 aaKnown RBP28.97■■■□□ 2.23
HOXB3-208ENST00000476342 CAPN12Q6ZSI9 719 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 KIAA0408Q6ZU52 694 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 C2CD4AQ8NCU7 369 aaPredicted RBP28.97■■■□□ 2.23
HOXB3-208ENST00000476342 CCDC74AQ96AQ1 378 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 BIRC8Q96P09 236 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 CCDC68Q9H2F9 335 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 SARS2Q9NP81 518 aaKnown RBP28.97■■■□□ 2.23
HOXB3-208ENST00000476342 RNF215Q9Y6U7 377 aa28.97■■■□□ 2.23
HOXB3-208ENST00000476342 ASXL3Q9C0F0 2248 aa28.96■■■□□ 2.23
HOXB3-208ENST00000476342 RP1P56715 2156 aa28.96■■■□□ 2.23
HOXB3-208ENST00000476342 TRIM16O95361 564 aa28.96■■■□□ 2.23
HOXB3-208ENST00000476342 FMO4P31512 558 aa28.96■■■□□ 2.23
HOXB3-208ENST00000476342 CARSP49589 748 aaKnown RBP28.96■■■□□ 2.23
HOXB3-208ENST00000476342 HHEXQ03014 270 aa28.96■■■□□ 2.23
HOXB3-208ENST00000476342 BOP1Q14137 746 aaKnown RBP28.96■■■□□ 2.23
HOXB3-208ENST00000476342 ZNF658BQ4V348 819 aaPredicted RBP28.96■■■□□ 2.23
HOXB3-208ENST00000476342 SYTL3Q4VX76 610 aa28.96■■■□□ 2.23
HOXB3-208ENST00000476342 TRIM48Q8IWZ4 208 aa28.96■■■□□ 2.23
HOXB3-208ENST00000476342 LILRA3Q8N6C8 439 aaPredicted RBP28.96■■■□□ 2.23
HOXB3-208ENST00000476342 C9orf72Q96LT7 481 aa28.96■■■□□ 2.23
HOXB3-208ENST00000476342 SCHIP1Q9P0W5 487 aaPredicted RBP28.96■■■□□ 2.23
HOXB3-208ENST00000476342 ZFATQ9P243 1243 aa28.96■■■□□ 2.23
HOXB3-208ENST00000476342 CPNE7Q9UBL6 633 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms