RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 SYCE1LA8MT33 242 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 KLF11O14901 512 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 PLRG1O43660 514 aaKnown RBP6.93□□□□□ -1.3
SHQ1-207ENST00000475558 SH3BP5O60239 455 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 ADAM23O75077 832 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 RNASEH2AO75792 299 aaKnown RBP6.93□□□□□ -1.3
SHQ1-207ENST00000475558 PCDH8O95206 1070 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 FTH1P02794 183 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 FTH1P19P0C7X4 201 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 ATP1B2P14415 290 aaPredicted RBP6.93□□□□□ -1.3
SHQ1-207ENST00000475558 GNSP15586 552 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 CHN1P15882 459 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 KELP23276 732 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 GABRB3P28472 473 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 FMO4P31512 558 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 SERPINB5P36952 375 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 PSMD8P48556 350 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 NUMBP49757 651 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 IL2P60568 153 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 MESP2Q0VG99 397 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 CNTN1Q12860 1018 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 GTF2H3Q13889 308 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 CHRNA6Q15825 494 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 HENMT1Q5T8I9 393 aaKnown RBP6.93□□□□□ -1.3
SHQ1-207ENST00000475558 METTL2BQ6P1Q9 378 aaKnown RBP6.93□□□□□ -1.3
SHQ1-207ENST00000475558 CNSTQ6PJW8 725 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 RGS9BPQ6ZS82 235 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 NEK10Q6ZWH5 1172 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 PARS2Q7L3T8 475 aaKnown RBP6.93□□□□□ -1.3
SHQ1-207ENST00000475558 ZSWIM9Q86XI8 627 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 DCP2Q8IU60 420 aaKnown RBP6.93□□□□□ -1.3
SHQ1-207ENST00000475558 SLC22A9Q8IVM8 553 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 SFTPA1Q8IWL2 248 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 UNC5BQ8IZJ1 945 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 DEFB119Q8N690 84 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 BEND7Q8N7W2 519 aaPredicted RBP6.93□□□□□ -1.3
SHQ1-207ENST00000475558 GPATCH11Q8N954 259 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 GPR26Q8NDV2 337 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 PHC3Q8NDX5 983 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 DENND6BQ8NEG7 585 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 SNIP1Q8TAD8 396 aaKnown RBP6.93□□□□□ -1.3
SHQ1-207ENST00000475558 TCP10LQ8TDR4 215 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 LRRC8CQ8TDW0 803 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 ASZ1Q8WWH4 475 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 CKAP2Q8WWK9 683 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 LPGAT1Q92604 370 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 VOPP1Q96AW1 172 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 ARRDC3Q96B67 414 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 EID2BQ96D98 161 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 DTD2Q96FN9 168 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 UBXN10Q96LJ8 280 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 PLCD4Q9BRC7 762 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 C1QTNF2Q9BXJ5 285 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 TRIM54Q9BYV2 358 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 ZDHHC5Q9C0B5 715 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 BTBD1Q9H0C5 482 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 NSRP1Q9H0G5 558 aaKnown RBP6.93□□□□□ -1.3
SHQ1-207ENST00000475558 ABCG8Q9H221 673 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 FAM96AQ9H5X1 160 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 SUDS3Q9H7L9 328 aaPredicted RBP6.93□□□□□ -1.3
SHQ1-207ENST00000475558 GPAMQ9HCL2 828 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 BPIFA1Q9NP55 256 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 FSCN3Q9NQT6 498 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 TRMT6Q9UJA5 497 aaKnown RBP6.93□□□□□ -1.3
SHQ1-207ENST00000475558 SARDHQ9UL12 918 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 HCN2Q9UL51 889 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 HS3ST3A1Q9Y663 406 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 FREM2Q5SZK8 3169 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 PCDH15Q96QU1 1955 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 FLNBO75369 2602 aaKnown RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 IGSF10Q6WRI0 2623 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 PLXNB3Q9ULL4 1909 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 DOCK4Q8N1I0 1966 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 IGLV3-16A0A075B6K0 115 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TBC1D3DA0A087WVF3 549 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TBC1D3IA0A087WXS9 549 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TBC1D3EA0A087X179 549 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TBC1D3KA0A087X1G2 549 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 IGHV1OR15-9A0A0B4J2B8 117 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 A0A1W2PQF6 199 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 UBA6A0AVT1 1052 aaPredicted RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 HMX2A2RU54 273 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 PABPN1LA6NDY0 278 aaKnown RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TBC1D3FA6NER0 549 aaPredicted RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TBC1D3LB9A6J9 549 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 GOLGA8TH3BQL2 631 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TPP1O14773 563 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 SLC16A5O15375 505 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 BUD23O43709 281 aaKnown RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 UGT1A9O60656 530 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 NDUFS2O75306 463 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 RECQL5O94762 991 aaPredicted RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 SLC25A14O95258 325 aaPredicted RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 ASMTLO95671 621 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 IGLV3-19P01714 112 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 ALDOAP04075 364 aaKnown RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 C1SP09871 688 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TBC1D3HP0C7X1 549 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 DHRS4L1P0CG22 281 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TPBGLP0DKB5 382 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms